DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30339 and CG3091

DIOPT Version :10

Sequence 1:NP_724813.1 Gene:CG30339 / 246549 FlyBaseID:FBgn0050339 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_569990.2 Gene:CG3091 / 31210 FlyBaseID:FBgn0029608 Length:303 Species:Drosophila melanogaster


Alignment Length:276 Identity:67/276 - (24%)
Similarity:131/276 - (47%) Gaps:29/276 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DLKALRDWLAKQPHLRARQDDQFLVGFLRGCKFSLEKTKSKLDHFYTIKTLMPELF-GKRLVDER 92
            ||.|   |....|:|..:.:...::.||:...|.:|:||:..:..|.::...|.|| .:.:.||.
  Fly    28 DLVA---WFEANPNLPEKIEPIVMLRFLKCTAFDVERTKALAELNYCMRNKSPHLFMDRNMEDEM 89

  Fly    93 NLILCRSGTYVRLP--KPWGTDGPRLQLTNYEKFDPK------EFKLLDLFRYQTMITEQSIRED 149
            .....|....:.||  .|   .|.:|........||:      |.|:. :.......|:..:..:
  Fly    90 TAEGLRVSDLLILPGVTP---QGNKLIFFRMADLDPRTRNSVEETKIF-VMMSDARFTKPDVERE 150

  Fly   150 ---------DHSNIS-GYVEIVDMAKMSLSFLAQLDFTLIKRMGIFAEKAQPTRLKGVHLINCPK 204
                     |.::|: |.|:|||:...:|..||.:...:::....|.::|.|:||:.:|:||||.
  Fly   151 TGSGADYVLDEADIAEGDVQIVDIGGYTLRHLAYVSIFVLRVYMKFLQEAYPSRLQAMHVINCPT 215

  Fly   205 EGVALLNLAKSLMPSKLQQ--RFHVYKNLEQLNEVIPREYLPEEYGGNNGRIADIQAEAEKKLLS 267
            ....|:::....:..:::.  |:|. :.::.|.:.:||:.||.||||..|.:|:::|:..:.:..
  Fly   216 YLDKLISMMSPFLREEVRNMIRYHT-EGMDSLYKEVPRDMLPNEYGGKAGTVAELKAKGIQSIRD 279

  Fly   268 YESYFAEDSQYGVDEQ 283
            ..:|.:::..:.|..|
  Fly   280 NAAYLSDERYWKVAAQ 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30339NP_724813.1 CRAL_TRIO_N 28..70 CDD:215024 12/40 (30%)
CRAL_TRIO 109..249 CDD:459890 37/157 (24%)
CG3091NP_569990.2 SEC14 99..262 CDD:469559 41/167 (25%)

Return to query results.
Submit another query.