DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30339 and Rlbp1

DIOPT Version :10

Sequence 1:NP_724813.1 Gene:CG30339 / 246549 FlyBaseID:FBgn0050339 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001099744.1 Gene:Rlbp1 / 293049 RGDID:1309649 Length:317 Species:Rattus norvegicus


Alignment Length:265 Identity:59/265 - (22%)
Similarity:113/265 - (42%) Gaps:37/265 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 AETELNEVEERVPADLKALRDWLAKQ------------PHLRARQDDQFLVGFLRGCKFSLEKTK 67
            |:.||||.||.....::.|::.:..|            ..::|| |..||:.|:|..||.:.:..
  Rat    48 AKDELNEREETRDEAVRELQELVQAQAASGEELAVAVAERVQAR-DSAFLLRFIRARKFDVGRAY 111

  Fly    68 SKLDHFYTIKTLMPELFGKRLVDERNL--------ILCRSGTYVRLPKPWGTDGPRLQLTNYEKF 124
            ..|..:...:...||||....::....        :|.....|.|:          :.|.|.|.:
  Rat   112 ELLKGYVNFRLQYPELFDSLSMEALRCTIEAGYPGVLSSRDKYGRV----------VMLFNIENW 166

  Fly   125 DPKEFKLLDLFRYQTMITEQSIREDDHSNISGYVEIVDMAKMSLSFLAQLDFTLIKRMGIFAEKA 189
            ..:|....::.:....|.|: :.|::.:.|:|:..:.:....::...|.|..:.:|:|....:.:
  Rat   167 HCEEVTFDEILQAYCFILEK-LLENEETQINGFCIVENFKGFTMQQAAGLRPSDLKKMVDMLQDS 230

  Fly   190 QPTRLKGVHLINCPKEGVALLNLAKSLMPSKLQQRFHVY-KNLEQLNEVIPREYLPEEYGGN--- 250
            .|.|.|.:|.|:.|.......|:.|..:.:||.||..|: .:|:...:.|....||.::||.   
  Rat   231 FPARFKAIHFIHQPWYFTTTYNVVKPFLKNKLLQRVFVHGDDLDGFFQEIDENILPADFGGTLPK 295

  Fly   251 -NGRI 254
             :|::
  Rat   296 YDGKV 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30339NP_724813.1 CRAL_TRIO_N 28..70 CDD:215024 11/53 (21%)
CRAL_TRIO 109..249 CDD:459890 30/140 (21%)
Rlbp1NP_001099744.1 CRAL_TRIO_N 60..117 CDD:215024 12/57 (21%)
SEC14 141..292 CDD:469559 34/161 (21%)

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