DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30339 and Rlbp1

DIOPT Version :9

Sequence 1:NP_724813.1 Gene:CG30339 / 246549 FlyBaseID:FBgn0050339 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001166954.1 Gene:Rlbp1 / 19771 MGIID:97930 Length:317 Species:Mus musculus


Alignment Length:282 Identity:65/282 - (23%)
Similarity:118/282 - (41%) Gaps:42/282 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 AETELNEVEERVPADLKALRDW------------LAKQPHLRARQDDQFLVGFLRGCKFSLEKTK 67
            |:.||||.||.....::.|::.            ||....::|| |..||:.|:|..||.:.:..
Mouse    48 AKDELNEKEETREEAVRELQELVQAQAASGEELALAVAERVQAR-DSAFLLRFIRARKFDVGRAY 111

  Fly    68 SKLDHFYTIKTLMPELFGKRLVDERNL--------ILCRSGTYVRLPKPWGTDGPRLQLTNYEKF 124
            ..|..:...:...||||....::....        :|.....|.|:          :.|.|.|.:
Mouse   112 ELLKGYVNFRLQYPELFDSLSMEALRCTIEAGYPGVLSSRDKYGRV----------VMLFNIENW 166

  Fly   125 DPKEFKLLDLFRYQTMITEQSIREDDHSNISGYVEIVDMAKMSLSFLAQLDFTLIKRMGIFAEKA 189
            ..:|....::.:....|.|: :.|::.:.|:|:..:.:....::...|.|..:.:|:|....:.:
Mouse   167 HCEEVTFDEILQAYCFILEK-LLENEETQINGFCIVENFKGFTMQQAAGLRPSDLKKMVDMLQDS 230

  Fly   190 QPTRLKGVHLINCPKEGVALLNLAKSLMPSKLQQRFHVY-KNLEQLNEVIPREYLPEEYGGN--- 250
            .|.|.|.:|.|:.|.......|:.|..:.:||.||..|: .:|:...:.|....||.::||.   
Mouse   231 FPARFKAIHFIHQPWYFTTTYNVVKPFLKNKLLQRVFVHGDDLDGFFQEIDENILPADFGGTLPK 295

  Fly   251 -NGRIADIQ-----AEAEKKLL 266
             :|::...|     ||.|...|
Mouse   296 YDGKVVAEQLFGPRAEVENTAL 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30339NP_724813.1 CRAL_TRIO_N 28..70 CDD:215024 12/53 (23%)
CRAL_TRIO 109..250 CDD:279044 31/141 (22%)
Rlbp1NP_001166954.1 CRAL_TRIO_N 60..117 CDD:215024 13/57 (23%)
CRAL_TRIO 143..292 CDD:395525 34/159 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835991
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X106
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.750

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