DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30339 and ctg-2

DIOPT Version :9

Sequence 1:NP_724813.1 Gene:CG30339 / 246549 FlyBaseID:FBgn0050339 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001254156.1 Gene:ctg-2 / 174360 WormBaseID:WBGene00011756 Length:408 Species:Caenorhabditis elegans


Alignment Length:326 Identity:72/326 - (22%)
Similarity:114/326 - (34%) Gaps:88/326 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LSAELRRIAETELNEVEERVPADLKALRDWLAKQPHLRARQDDQF-----LVGFLR-------GC 59
            ||.|....:..|:.|.:.::   |..||..:.|:..|....||.|     |:|:.|       ..
 Worm     8 LSGERMSTSTGEITESDRKL---LDELRKRIHKELELVKEYDDDFSLMRWLIGWDRKIDVVVPKI 69

  Fly    60 KFS----------------LEKTKSKLDH-FYTIKTLMPELFGKRLVDERNLILCRSGTYVRLPK 107
            |||                |||...|.|. ...::.|...|.|   :|..|.:       |.|..
 Worm    70 KFSLRAIHALGLDQEDLSTLEKVAQKCDDCSVPLRYLPGSLIG---LDHENNV-------VSLQM 124

  Fly   108 PWGTDGPRLQLTNYEKFDPKEFKLLDLFRYQTMITE---QSIR--EDDHSNISGYVEIVDMAKMS 167
            ....|...|.......         ||:|.:...:|   |.||  |.:.....|...|.|:..:|
 Worm   125 IGHLDAAGLMPATRNS---------DLYRMRIAESEGVMQIIRKMEKEQGKPLGTSVIFDLDGLS 180

  Fly   168 LSFLAQLDFTLIKRMGIFAEKAQ---PTRLKGVHLINCPKEGVALLNLAKSLMPSKLQQRFHVYK 229
               :.|:|...:|.:.....:.|   |..::.:.::|.|.....|.::....:..:.||:..:..
 Worm   181 ---MVQIDLAALKVVTTMLSQLQEMFPDVIRKIFIVNTPTFIQVLWSMISPCLAKQTQQKVKILG 242

  Fly   230 N--LEQLNEVIPREYLPEEYGGNNGRIADIQAEAEKKLLSYESYFAEDSQYGVDEQLRPGKRVNA 292
            |  .:.|.|.|..|.|.|.:||..      :||.|               ||   .:|.|.::.|
 Worm   243 NDWKQHLKENIGEEVLFERWGGTR------KAETE---------------YG---NVRMGGKIPA 283

  Fly   293 D 293
            :
 Worm   284 E 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30339NP_724813.1 CRAL_TRIO_N 28..70 CDD:215024 17/69 (25%)
CRAL_TRIO 109..250 CDD:279044 32/150 (21%)
ctg-2NP_001254156.1 SEC14 98..267 CDD:214706 40/196 (20%)
EMP24_GP25L 331..>405 CDD:279450
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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