DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30339 and clvs2

DIOPT Version :9

Sequence 1:NP_724813.1 Gene:CG30339 / 246549 FlyBaseID:FBgn0050339 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_017949794.1 Gene:clvs2 / 100496225 XenbaseID:XB-GENE-1005080 Length:327 Species:Xenopus tropicalis


Alignment Length:322 Identity:75/322 - (23%)
Similarity:137/322 - (42%) Gaps:73/322 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LSAELRRIAETELNEVEERVPADLKALRDWLAKQPHLR-ARQDDQFLVGFLRGCKFS-------- 62
            ||.|....|..||||..:.:..|::.:||.:..:|.:. .|.||.|::.|||..||:        
 Frog     8 LSPETLEKARLELNENPDTLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRARKFNHFEAFRLL 72

  Fly    63 ---LEKTKSKLDHFYTIKTLMPEL-----------------FGKRLVDERNLILCRSGTYVRLPK 107
               .|..:..||.|...|...|.:                 ||:::     |:|..:.       
 Frog    73 AQYFEYRQQNLDMFKNFKATDPGIKQGLKDGFPGVLSNLDHFGRKI-----LVLFAAN------- 125

  Fly   108 PWGTDGPRLQLTNYEKFDPKEFKLLDLFRYQTMITEQSIREDDHSNISGYVEIVDMAKMSLSFLA 172
             |               |...:.|:|:.| ..:::.:::.||....::|:|.|:|.:..:....:
 Frog   126 -W---------------DQSRYTLVDILR-AILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQAS 173

  Fly   173 QLDFTLIKRMGIFAEKAQPTRLKGVHLINCPKEGVALLNLAKSLMPSKLQQRFHVY-KNLEQLNE 236
            :|..::::......:.:.|.|..|:|.:|.|....||..:.:..:..|.::|..:: .||..|::
 Frog   174 KLTPSMLRLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLHGNNLNSLHQ 238

  Fly   237 VIPREYLPEEYGG-----NNGRIADIQAEAEKKLLSYESYFAEDSQYGVDEQLRPGKRVNAD 293
            :|..|.||.|:||     :.|..|       :.||.:|  :.::|:|.|:....|.|.|..|
 Frog   239 LIHPEILPSEFGGMLPPYDMGTWA-------RTLLDHE--YDDESEYNVESYSMPTKEVEKD 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30339NP_724813.1 CRAL_TRIO_N 28..70 CDD:215024 14/53 (26%)
CRAL_TRIO 109..250 CDD:279044 32/146 (22%)
clvs2XP_017949794.1 CRAL_TRIO_N 29..75 CDD:215024 13/45 (29%)
SEC14 106..251 CDD:238099 34/173 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X106
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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