DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30339 and clvs1

DIOPT Version :9

Sequence 1:NP_724813.1 Gene:CG30339 / 246549 FlyBaseID:FBgn0050339 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_012819596.1 Gene:clvs1 / 100037913 XenbaseID:XB-GENE-5740434 Length:332 Species:Xenopus tropicalis


Alignment Length:260 Identity:62/260 - (23%)
Similarity:119/260 - (45%) Gaps:26/260 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ANLRPLSAELRRIAETELNEVEERVPADLKALRDWLAKQPHLR-ARQDDQFLVGFLRGCKFSLEK 65
            |.|.|.:.|..|:   ||||..:.:..|::.:||.:..:|.:. .|.||.|::.|||..||:..:
 Frog     6 AGLSPETIEKSRL---ELNENPDTLHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRARKFNQME 67

  Fly    66 TKSKLDHFYTIKTLMPELFGKRLVDERNL----------ILCRSGTYVRLPKPWGTDGPRLQLTN 120
            ....|..::..:.|..::|.....|:..:          :|.....|          |.::.|..
 Frog    68 AFRLLAQYFQYRQLNLDMFKNLKADDPGIKRALMDGFPGVLENRDHY----------GRKILLLF 122

  Fly   121 YEKFDPKEFKLLDLFRYQTMITEQSIREDDHSNISGYVEIVDMAKMSLSFLAQLDFTLIKRMGIF 185
            ...:|......:|:.| ..:::.:.:.||....|:|::.|:|.:..|....::|..::::.....
 Frog   123 AANWDQSRNSFVDILR-AILLSLEVLIEDQELQINGFILIIDWSNFSFKQASKLTPSILRLAIEG 186

  Fly   186 AEKAQPTRLKGVHLINCPKEGVALLNLAKSLMPSKLQQRFHVY-KNLEQLNEVIPREYLPEEYGG 249
            .:.:.|.|..|||.:|.|....||..:.|..:..|.::|..:: .||..|:::|..:.||.|:||
 Frog   187 LQDSFPARFGGVHFVNQPWYIHALYTIIKPFLKDKTRKRIFLHGNNLNSLHQLIHPDCLPSEFGG 251

  Fly   250  249
             Frog   252  251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30339NP_724813.1 CRAL_TRIO_N 28..70 CDD:215024 13/42 (31%)
CRAL_TRIO 109..250 CDD:279044 34/142 (24%)
clvs1XP_012819596.1 CRAL_TRIO_N 29..75 CDD:215024 14/45 (31%)
SEC14 106..252 CDD:238099 36/157 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X106
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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