DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30338 and Rwdd2a

DIOPT Version :9

Sequence 1:NP_724811.1 Gene:CG30338 / 246548 FlyBaseID:FBgn0050338 Length:288 Species:Drosophila melanogaster
Sequence 2:NP_001139440.1 Gene:Rwdd2a / 69519 MGIID:1916769 Length:292 Species:Mus musculus


Alignment Length:307 Identity:96/307 - (31%)
Similarity:149/307 - (48%) Gaps:51/307 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EELQTYRRCVGLQLEELELLSSIYCAPGELHMLDAGVVADFNEFLKDDKTKPATSLLSHLEYVVK 68
            |.||       |||.|:|:|.|::...||:.:.|...:.:...:|:..:    .:|..::|:|:.
Mouse     7 ESLQ-------LQLLEMEMLFSMFPNQGEVKLEDVNALTNIKRYLEGTR----EALPPNIEFVIT 60

  Fly    69 LTL-PGKQCVEVRVELPHLYPLLEQARVSVHTTLLGKSKE-----QRLKND-LEQYHGERREEDA 126
            |.: ..|..::::|.:||.||.       |...|.|:|.|     |.|.|. |..|.|  ..:..
Mouse    61 LQIEEPKVTIDLQVTMPHNYPY-------VALQLFGRSPELDRQQQLLLNQALSAYLG--TFDPG 116

  Fly   127 EPYIFQLLSWLQDRIEDLLKRPASEFEVQQVASSDPQ---QPPATELQRIWIYSHHIKSSAKRQE 188
            |..:...:.||||       ..||.|..::: |.:|.   :|......|:|||||||.....|::
Mouse   117 ELCVCAAIQWLQD-------NSASYFLTRKL-SDEPSVQAKPVKNTFLRMWIYSHHIYQQDLRKK 173

  Fly   189 LIRQARQLELTGFSRPGKPGIICVEGDSANVQEFWRTIKALRWQKISVVRTEPRQRK------RG 247
            ::...::|::|||...||||||||||...:.:|||.||:...|:.||....|..:.:      |.
Mouse   174 ILEVGKRLDVTGFCMTGKPGIICVEGFKNHCEEFWHTIRYPNWKHISCKHAESVETEGDGEDLRL 238

  Fly   248 FEDFSEQLFNA--EEGV-----MNMGQFIRFLEAHGFGYMKSELFGL 287
            |..|.|.|..|  :.|:     ||:|||:.||..|...::...|||:
Mouse   239 FHSFEELLLEAHGDYGLRNDYHMNLGQFLEFLRKHKSEHVFQILFGI 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30338NP_724811.1 DUF1115 175..>240 CDD:284060 29/64 (45%)
Rwdd2aNP_001139440.1 RWD 7..130 CDD:283440 40/149 (27%)
DUF1115 160..281 CDD:284060 45/120 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831429
Domainoid 1 1.000 78 1.000 Domainoid score I8762
eggNOG 1 0.900 - - E1_28IR6
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12315
Inparanoid 1 1.050 120 1.000 Inparanoid score I4759
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53050
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004978
OrthoInspector 1 1.000 - - otm43228
orthoMCL 1 0.900 - - OOG6_103700
Panther 1 1.100 - - O PTHR15955
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5060
SonicParanoid 1 1.000 - - X3514
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.830

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