DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-3 and STV1

DIOPT Version :9

Sequence 1:NP_725837.1 Gene:Vha100-3 / 246543 FlyBaseID:FBgn0028669 Length:904 Species:Drosophila melanogaster
Sequence 2:NP_013770.1 Gene:STV1 / 855076 SGDID:S000004658 Length:890 Species:Saccharomyces cerevisiae


Alignment Length:981 Identity:276/981 - (28%)
Similarity:438/981 - (44%) Gaps:195/981 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KSFFRSEDMDLCQLLLHTENAFDCLIEVGHHGAVQFNNVYDEDRLLNNLYSKKVTQCYELLRIVD 76
            ::.|||.||...||.:..|...:....:|........::..:.......|..::.:..|:.|:|.
Yeast     5 EAIFRSADMTYVQLYIPLEVIREVTFLLGKMSVFMVMDLNKDLTAFQRGYVNQLRRFDEVERMVG 69

  Fly    77 SLH---------TYIVQLHV----NEIFYPDV-DRENRLKEKDLAKYSDSLKRI---HVEASAVT 124
            .|:         |:...||:    |:|..||: |..|.::...|...:|.:|.|   ...|..:.
Yeast    70 FLNEVVEKHAAETWKYILHIDDEGNDIAQPDMADLINTMEPLSLENVNDMVKEITDCESRARQLD 134

  Fly   125 EHYYRLDSRRNRMMEHSFALNKANKYM-----------------------------------VSD 154
            |....|.|:.|.::|....:.:.:|::                                   :||
Yeast   135 ESLDSLRSKLNDLLEQRQVIFECSKFIEVNPGIAGRATNPEIEQEERDVDEFRMTPDDISETLSD 199

  Fly   155 --------------MGSELLYSESTVIGLVQDATTTSGAYPAHLNYMI-GCIRADKFYSFELLLY 204
                          :|::|..::|     |:|.:.....| .| .||| |.||..|......:|:
Yeast   200 AFSFDDETPQDRGALGNDLTRNQS-----VEDLSFLEQGY-QH-RYMITGSIRRTKVDILNRILW 257

  Fly   205 RLCSFNLIIRFSEMPSPVYEYHYGYKPERVRKFAILMMASSTMIWPKVLKICAHYHVNIYDCPSS 269
            ||...|||.:...:..|:.|     ..|:|.|...::......:..||.::....:..|....:.
Yeast   258 RLLRGNLIFQNFPIEEPLLE-----GKEKVEKDCFIIFTHGETLLKKVKRVIDSLNGKIVSLNTR 317

  Fly   270 ASQREDKVKELSQEIVNVEKVLKEAELMRRQILEVAGRDLFIIRVNLRKALKVYDLMNRLRLVGG 334
            :|:..|   .|:::|.:::::|...|......|.|....|.:.....::...||..:|:.:    
Yeast   318 SSELVD---TLNRQIDDLQRILDTTEQTLHTELLVIHDQLPVWSAMTKREKYVYTTLNKFQ---- 375

  Fly   335 VEVPRYLLAEVYIPSSDVPEVEVILRNASRISGGADNIDSSDEDEMNDMKTMPNTTPYPIEADFQ 399
             :..:.|:||.::||:::..::             |::....|...::..|:.|..         
Yeast   376 -QESQGLIAEGWVPSTELIHLQ-------------DSLKDYIETLGSEYSTVFNVI--------- 417

  Fly   400 PLEDMSAGAILLKKNRLVNHMPPTYFRLNKFTRGFQNLIDAYGMADYKELNPAPYTIITFPFLFA 464
                            |.|.:||||.|.||||:.||:::||||:|.|||:|....|::||||:||
Yeast   418 ----------------LTNKLPPTYHRTNKFTQAFQSIVDAYGIATYKEINAGLATVVTFPFMFA 466

  Fly   465 VMFGDLGHGILLILFSSLMIWKHREIEKYQINATSENEILNILYAGRYIILLMGVFSVYMGLVYN 529
            :||||:|||.:|.|.:..::...|     :..|...:||.::.:.|||::||||.||||.||:||
Yeast   467 IMFGDMGHGFILFLMALFLVLNER-----KFGAMHRDEIFDMAFTGRYVLLLMGAFSVYTGLLYN 526

  Fly   530 IVMAKGFNLFGSSW----------SCRYNETTVYDPAFHVTLDSSHPHFYSGHPYPLGMDPVWAV 584
            .:.:|...:|.|.|          |....:|.|                     ||.|:|..|. 
Yeast   527 DIFSKSMTIFKSGWQWPSTFRKGESIEAKKTGV---------------------YPFGLDFAWH- 569

  Fly   585 CGQDS-ITTTNSLKMKMAIVLGISQMMFGLGLAAANCVLMNRKADLILVVIPQMIFMLCLFGYLV 648
             |.|: :..:||.|||::|::|.:.|.:....:..|....|.|.|:|...||.::||..:||||.
Yeast   570 -GTDNGLLFSNSYKMKLSILMGYAHMTYSFMFSYINYRAKNSKVDIIGNFIPGLVFMQSIFGYLS 633

  Fly   649 FLIFYKWMS--YGGHKPAPYNAACAPSVLITFINMMLMKKEDPVENCLDYMYPNERMIEFALVGI 711
            :.|.|||..  ....||       ||.:|...|||.|  ....::   |.:|..:..::..|:..
Yeast   634 WAIVYKWSKDWIKDDKP-------APGLLNMLINMFL--APGTID---DQLYSGQAKLQVVLLLA 686

  Fly   712 AFCTIPILLAGKPIYLMRRRRKMQQERERDFKRM----RRQTIAEMRST------MRYTDDDNSE 766
            |...:|.||..||:.|.|..:.....|...::.:    ..:.||:.|.:      |..:|..:..
Yeast   687 ALVCVPWLLLYKPLTLRRLNKNGGGGRPHGYQSVGNIEHEEQIAQQRHSAEGFQGMIISDVASVA 751

  Fly   767 TSRQKSVDNEEE--HEMSEIWIHSGIHTIETVLGSVSHTASYLRLWALSLAHDQLSDVLWHMVLT 829
            .|..:||...|:  ....::.||..|||||..|..:||||||||||||||||.|||.|||.|.::
Yeast   752 DSINESVGGGEQGPFNFGDVMIHQVIHTIEFCLNCISHTASYLRLWALSLAHAQLSSVLWDMTIS 816

  Fly   830 KGFANT---LPLYYGVPVLMATFFAWAILTVAILVMMEGLSAFLHTLRLHWVEFQSKFFGGAGES 891
            ..|::.   .||  .|..::..|..|.:|||.|||.|||.||.||.|||||||..||||.|.|.:
Yeast   817 NAFSSKNSGSPL--AVMKVVFLFAMWFVLTVCILVFMEGTSAMLHALRLHWVEAMSKFFEGEGYA 879

  Fly   892 FKAFNF 897
            ::.|:|
Yeast   880 YEPFSF 885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-3NP_725837.1 V_ATPase_I 38..897 CDD:279793 267/953 (28%)
STV1NP_013770.1 V_ATPase_I 32..885 CDD:396194 267/952 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344197
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1269
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S598
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - O PTHR11629
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.650

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