DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-3 and VPH1

DIOPT Version :9

Sequence 1:NP_725837.1 Gene:Vha100-3 / 246543 FlyBaseID:FBgn0028669 Length:904 Species:Drosophila melanogaster
Sequence 2:NP_014913.3 Gene:VPH1 / 854444 SGDID:S000005796 Length:840 Species:Saccharomyces cerevisiae


Alignment Length:932 Identity:277/932 - (29%)
Similarity:438/932 - (46%) Gaps:157/932 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVKSFFRSEDMDLCQLLLHTENAFDCLIEVGHHGAVQFNNVYDEDRLLNNLYSKKVTQCYELLRI 74
            |.::.|||.:|.|.|..:..|.:.|....:|..|.|||.::..:.|.....:..::.:    |..
Yeast     4 KEEAIFRSAEMALVQFYIPQEISRDSAYTLGQLGLVQFRDLNSKVRAFQRTFVNEIRR----LDN 64

  Fly    75 VDSLHTYIVQLHVNEIFYPDVDREN-RLKEKDLAKYSDSLKRIHVEAS-AVTEHYYR-------- 129
            |:..:.|         ||..:.:.: :|.|.|..||.|....::|..| :|.:.|.|        
Yeast    65 VERQYRY---------FYSLLKKHDIKLYEGDTDKYLDGSGELYVPPSGSVIDDYVRNASYLEER 120

  Fly   130 ----------LDSRRNRMMEHSFALNKANKYMV-SDMGSELLYSESTVIGLVQDAT--TTSGAYP 181
                      ::.::|.:.::.|.|...:::.: .|......|.:..:|    ||.  ..:.|..
Yeast   121 LIQMEDATDQIEVQKNDLEQYRFILQSGDEFFLKGDNTDSTSYMDEDMI----DANGENIAAAIG 181

  Fly   182 AHLNYMIGCIRADKFYSFELLLYRLCSFNLIIRFSEMPSPVY-----EYHYGYKPERVRKFAILM 241
            |.:||:.|.|..||..:.|.:|:|:...||..:..|:..|||     ||.:        |.|.::
Yeast   182 ASVNYVTGVIARDKVATLEQILWRVLRGNLFFKTVEIEQPVYDVKTREYKH--------KNAFIV 238

  Fly   242 MASSTMIWPKVLKICAHYHVNIYDCPSSASQREDKVKELSQEIVNVEKVLKEAELMRRQILEVAG 306
            .:...:|..::.||......|:||..||...|..::.::::.:.::..|||.........|....
Yeast   239 FSHGDLIIKRIRKIAESLDANLYDVDSSNEGRSQQLAKVNKNLSDLYTVLKTTSTTLESELYAIA 303

  Fly   307 RDLFIIRVNLRKALKVYDLMNRLRLVGGVEVPRYLLAEVYIPSSDVPEVEVIL-RNASRISGGAD 370
            ::|.....::.:...:::::|:.......::   |:||.:||..::..::..| ...:|:  |.|
Yeast   304 KELDSWFQDVTREKAIFEILNKSNYDTNRKI---LIAEGWIPRDELATLQARLGEMIARL--GID 363

  Fly   371 NIDSSDEDEMNDMKTMPNTTPYPIEADFQPLEDMSAGAILLKKNRLVNHMPPTYFRLNKFTRGFQ 435
                                   :.:..|.|:              .||.|||:.|.||||.|||
Yeast   364 -----------------------VPSIIQVLD--------------TNHTPPTFHRTNKFTAGFQ 391

  Fly   436 NLIDAYGMADYKELNPAPYTIITFPFLFAVMFGDLGHGILLILFSSLMIWKHREIEKYQINATSE 500
            ::.|.||:|.|:|:|....||:||||:||:||||:|||.|:.|.:..::     :.:.:||....
Yeast   392 SICDCYGIAQYREINAGLPTIVTFPFMFAIMFGDMGHGFLMTLAALSLV-----LNEKKINKMKR 451

  Fly   501 NEILNILYAGRYIILLMGVFSVYMGLVYNIVMAKGFNLFGSSWSCRYNETTVYDPAFHVTLDSSH 565
            .||.::.:.||||||||||||:|.|.:||.:.:|...:|.|.|..                   .
Yeast   452 GEIFDMAFTGRYIILLMGVFSMYTGFLYNDIFSKTMTIFKSGWKW-------------------P 497

  Fly   566 PHFYSGH--------PYPLGMDPVWAVCG-QDSITTTNSLKMKMAIVLGISQMMFGLGLAAANCV 621
            .|:..|.        .||:|:|  ||..| ::::..:||.|||::|::|...|.:....:.||.:
Yeast   498 DHWKKGESITATSVGTYPIGLD--WAWHGTENALLFSNSYKMKLSILMGFIHMTYSYFFSLANHL 560

  Fly   622 LMNRKADLILVVIPQMIFMLCLFGYLVFLIFYK----WMSYGGHKPAPYNAACAPSVLITFINMM 682
            ..|...|:|...||.::||..:||||...|.||    |:..|  ||       ||.:|...|||.
Yeast   561 YFNSMIDIIGNFIPGLLFMQGIFGYLSVCIVYKWAVDWVKDG--KP-------APGLLNMLINMF 616

  Fly   683 LMKKEDPVENCLDYMYPNERMIEFALVGIAFCTIPILLAGKPIYLMRRRRKMQQERERDFKRMRR 747
            |  ....::   |.:||::..::..|:.:|...||.||..||::.....:|...|.....:....
Yeast   617 L--SPGTID---DELYPHQAKVQVFLLLMALVCIPWLLLVKPLHFKFTHKKKSHEPLPSTEADAS 676

  Fly   748 QTIAEMRSTMRYTDDDNSETSRQKSVDNEEEHEMSEIWIHSGIHTIETVLGSVSHTASYLRLWAL 812
            ....|.:..:...|.|::|.....|..:.|  :..:|.||..|||||..|..|||||||||||||
Yeast   677 SEDLEAQQLISAMDADDAEEEEVGSGSHGE--DFGDIMIHQVIHTIEFCLNCVSHTASYLRLWAL 739

  Fly   813 SLAHDQLSDVLWHMV--LTKGFANTLPLYYGVPVLMATFFAWAILTVAILVMMEGLSAFLHTLRL 875
            ||||.|||.|||.|.  :..||..    :.||.:.:|.|..|..||.|:||:|||.||.||:|||
Yeast   740 SLAHAQLSSVLWTMTIQIAFGFRG----FVGVFMTVALFAMWFALTCAVLVLMEGTSAMLHSLRL 800

  Fly   876 HWVEFQSKFFGGAGESFKAFNF 897
            ||||..||||.|.|..::.|.|
Yeast   801 HWVESMSKFFVGEGLPYEPFAF 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-3NP_725837.1 V_ATPase_I 38..897 CDD:279793 267/902 (30%)
VPH1NP_014913.3 V_ATPase_I 31..822 CDD:396194 267/903 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344192
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1269
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S598
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - O PTHR11629
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.650

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