DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-3 and VHA-A2

DIOPT Version :9

Sequence 1:NP_725837.1 Gene:Vha100-3 / 246543 FlyBaseID:FBgn0028669 Length:904 Species:Drosophila melanogaster
Sequence 2:NP_179736.1 Gene:VHA-A2 / 816680 AraportID:AT2G21410 Length:821 Species:Arabidopsis thaliana


Alignment Length:909 Identity:280/909 - (30%)
Similarity:435/909 - (47%) Gaps:141/909 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RSEDMDLCQLLLHTENAFDCLIEVGHHGAVQFNNVYDEDRLLNNLYSKKVTQCYELLRIVDSLHT 80
            |||.|.|.|:::..|:|...:..:|..|.|||.::..|.......|:.::.:|.|:.|.:.....
plant    19 RSEPMQLVQVIVPMESAHLTVSYLGDLGLVQFKDLNSEKSPFQRTYAAQIKRCGEMARKIRFFKE 83

  Fly    81 YIVQLHVNEIFYPDVDRENRLKEKDLAKYSDSLKRIHVEASAVTEHYYRLDSRRNRMMEHSFALN 145
            .:.:..|..  ...:||||.:   ||......|:.:..|...:..:..:|....|.::|:...|.
plant    84 QMSKAGVTP--KETLDRENDI---DLDDVEVKLEELEAELVEINANNDKLQRSYNELVEYKLVLE 143

  Fly   146 KANKYMVS---------------DMGSELLYSESTVIGLVQDATTTSGAYPAHLNYMIGCIRADK 195
            ||.::..|               .:|.:||.:.     |:|:..:........|.::.|.:..:|
plant   144 KAGEFFASAHRSATAQQSEIETEQVGEDLLEAP-----LLQEEKSVDPTKQVKLGFLTGLVPREK 203

  Fly   196 FYSFELLLYRLCSFNLIIRFSEMPSPVYEYHYGYKPERVRKFAILMMASSTMIWPKVLKICAHYH 260
            ...||.:|:|....|:.||.|.:...|.:.:.|   |:..|...::..|......|:||||..:.
plant   204 SMVFERILFRATRGNIFIRQSVIEESVVDPNSG---EKAEKNVFVVFYSGERAKSKILKICEAFG 265

  Fly   261 VNIYDCPSSASQREDKVKELSQEIVNVEKVLKEAELMRRQILEVAGRDLFIIRVNLRKALKVYDL 325
            .|.|.......::...:.|:|..:..::..:......|..:||..|.......:.:||...:|..
plant   266 ANRYPFSEDLGKQAQMMTEVSGRLSELKTTIGAGLDQRNILLETIGDKFEQWNLKIRKEKAIYHT 330

  Fly   326 MNRLRLVGGVEV-PRYLLAEVYIPSSDVPEVEVILRNASRISGGADNIDSSDEDEMNDMKTMPNT 389
            :|.|.|    :| .:.|:.|.:.|.....|::..|..|:        :||:.:            
plant   331 LNMLSL----DVTKKCLVGEGWSPVFAATEIQDALHRAA--------VDSNSQ------------ 371

  Fly   390 TPYPIEADFQPLEDMSAGAILLKKNRLVNHMPPTYFRLNKFTRGFQNLIDAYGMADYKELNPAPY 454
                :.:.||.|.              ...||||:||.||||..||.::||||:|.|:|.||:.:
plant   372 ----VGSIFQVLR--------------TKEMPPTFFRTNKFTTAFQEIVDAYGVAKYQEANPSVF 418

  Fly   455 TIITFPFLFAVMFGDLGHGILLILFSSLMIWKHREIEKYQINATSENEILNILYAGRYIILLMGV 519
            ||:||||||||||||.||||.|:|.:..:|.:.:::...::     .:|:.:.:.|||:|.:|.:
plant   419 TIVTFPFLFAVMFGDWGHGICLLLATMYLILREKKLSSQKL-----GDIMEMAFGGRYVIFMMSL 478

  Fly   520 FSVYMGLVYNIVMAKGFNLFGSS-WSCR----YNETTVYDPAFHVTLDSSHPHFYSGHPYPLGMD 579
            ||:|.||:||...:..:.||.|| :.||    ...||:   ....|.|:          ||.|:|
plant   479 FSIYTGLIYNEFFSIPYPLFASSAYDCRDVSCSEATTI---GLIKTRDT----------YPFGVD 530

  Fly   580 PVWAVCGQDSITTTNSLKMKMAIVLGISQMMFGLGLAAANCVLMNRKADLILVVIPQMIFMLCLF 644
            |||... :..:...|||||||:|::|::||..|:.::..|........::....:|||||:.|||
plant   531 PVWHGT-RSELPFLNSLKMKMSILIGVAQMNLGIIMSFFNAKFFKSAVNIWFQFVPQMIFLNCLF 594

  Fly   645 GYLVFLIFYKWMSYGGHKPAPYNAACAPSVLITFINMMLMKKEDPVENCLDYMYPNERMIEFALV 709
            |||..||..||.:  |.:...|:         ..|.|.|...:|..||   .::||:::::...:
plant   595 GYLSVLIIIKWCT--GSQADLYH---------VMIYMFLSPMDDLGEN---QLFPNQKIVQLTFL 645

  Fly   710 GIAFCTIPILLAGKPIYLMRRRRKMQQERERDFKRMRRQTIAEMRSTMRYTDDDNSETSRQKSVD 774
            .:|..::|.:|..||..|     |.|.|       .|.|.::       |...|.::.|.|...:
plant   646 FLALVSVPWMLLPKPFIL-----KKQHE-------ARHQGLS-------YAQLDETDESLQVETN 691

  Fly   775 ----NEEEHEMSEIWIHSGIHTIETVLGSVSHTASYLRLWALSLAHDQLSDVLWHMVLTK--GFA 833
                ..||.|.|||::|..|||||.|||:||:||||||||||||||.:||.|.:..||..  ||.
plant   692 GGGHGHEEFEFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLMAWGFN 756

  Fly   834 NTLPLYYGVPVLMATFFAWAILTVAILVMMEGLSAFLHTLRLHWVEFQSKFFGGAGESFKAFNF 897
            |......|:.|.:   ||    ||.:|::||.||||||.|||||||:|:||:.|.|..|..|.|
plant   757 NVFIWIVGILVFI---FA----TVGVLLVMETLSAFLHALRLHWVEYQNKFYEGDGYKFAPFTF 813

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-3NP_725837.1 V_ATPase_I 38..897 CDD:279793 271/885 (31%)
VHA-A2NP_179736.1 V_ATPase_I 40..813 CDD:396194 271/886 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1269
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D181796at2759
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - O PTHR11629
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.780

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