DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-3 and atp6v0a2a

DIOPT Version :9

Sequence 1:NP_725837.1 Gene:Vha100-3 / 246543 FlyBaseID:FBgn0028669 Length:904 Species:Drosophila melanogaster
Sequence 2:XP_009303407.1 Gene:atp6v0a2a / 561469 ZFINID:ZDB-GENE-091113-4 Length:848 Species:Danio rerio


Alignment Length:915 Identity:320/915 - (34%)
Similarity:492/915 - (53%) Gaps:112/915 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SFFRSEDMDLCQLLLHTENAFDCLIEVGHHGAVQFNNVYDEDRLLNNLYSKKVTQCYELLRIVDS 77
            |.||||:|.|.||.|.:.:|:.|:.|:|..|.|:|.::..........:..::.:|.|:.||:..
Zfish     3 SGFRSEEMCLAQLFLQSGSAYACISELGEMGLVEFRDLNPSVSSFQRRFVSEIKRCEEMERILGY 67

  Fly    78 LHTYI--VQLHVNEIFYPDVDRENRLKEKDLAKYSDSLKRIHVEASAVTEHYYRLDSRRNRMMEH 140
            |...|  ..:.|.|...|.|    ....|::.:..:.|:|:.||.|.|.::..:|......:||:
Zfish    68 LLREIRKANIAVPEAEVPPV----APAPKNVLEIMEQLQRLEVELSEVAKNKEKLQRNLLELMEY 128

  Fly   141 SFALNKANKYMVSDMGSELL---YSE------STVIGLVQDATTTSGAYPAHLNYMIGCIRADKF 196
            :..|.....::.|....|.|   |.|      .:|.|     .|:.....|.|.::.|.|:..|.
Zfish   129 THMLRITRSFVHSRSRHEALGPQYEEFPSLETESVTG-----CTSMQRLGAKLGFVSGLIQRVKV 188

  Fly   197 YSFELLLYRLCSFNLIIRFSEMPSPVYEYHYGYKPERVRKFAILMMAS-STMIWPKVLKICAHYH 260
            .:||.:|:|:|....|:.::|:...:.:...|    .:||..:.:::. ...|..||.|||..||
Zfish   189 EAFERMLWRVCKGYTILSYAEVDESLADLDTG----EIRKNVVFLISFWGDQIGQKVQKICDCYH 249

  Fly   261 VNIYDCPSSASQREDKVKELSQEIVNVEKVLKEAELMRRQILEVAGRDL--FIIRVNLRKALKVY 323
            .:||..|.:..:|.|.:..|...|.::..||...|...:|:|..|....  ::::|...||  :|
Zfish   250 CHIYPHPETDEERADVMDSLRTRIQDLHNVLHRTEDYLKQVLHKASESAQSWVLQVKKMKA--IY 312

  Fly   324 DLMNRLRLVGGVEVPRYLLAEVYIPSSDVPEVEVILRNASRISGGADNIDSSDEDEMNDMKTMPN 388
            .::|   |.......:.|:|||:.|.||:..:...|...|| .|.|               |:|:
Zfish   313 HILN---LCSFDVTNKCLIAEVWCPVSDLANLRRALEEGSR-KGDA---------------TVPS 358

  Fly   389 TTPYPIEADFQPLEDMSAGAILLKKNRL-VNHMPPTYFRLNKFTRGFQNLIDAYGMADYKELNPA 452
            ..                       ||: .:..|||..|.||||.|||::::|||:.||:|::||
Zfish   359 FV-----------------------NRIPSSDTPPTLLRSNKFTSGFQSIVEAYGVGDYREVSPA 400

  Fly   453 PYTIITFPFLFAVMFGDLGHGILLILFSSLMIWKHREIEKYQINATSENEILNILYAGRYIILLM 517
            |:|||||||||||||||||||.:|.||:..|:.    .||........|||...|:.||||||:|
Zfish   401 PFTIITFPFLFAVMFGDLGHGSVLTLFALWMVL----TEKDHTRRRPGNEIRMTLFDGRYIILMM 461

  Fly   518 GVFSVYMGLVYNIVMAKGFNLFGSSWSCR--------YNETTVYDPAFHVTLDSSHPHFYSGHPY 574
            |:||:|.||:||...:|..|:|||:||.:        .|||...:  ..:||:.:....:|| ||
Zfish   462 GLFSIYTGLIYNDCFSKSLNIFGSAWSVKAMFTEQEWTNETLRSN--MLLTLNPNVSGVFSG-PY 523

  Fly   575 PLGMDPVWAVCGQDSITTTNSLKMKMAIVLGISQMMFGLGLAAANCVLMNRKADLILVVIPQMIF 639
            |||:||:|.: ..:.:|..||.||||::::|:..|.||:.|:..|.:...:|..:.|:.:|:::|
Zfish   524 PLGIDPIWNM-AVNRLTFLNSYKMKMSVIIGVVHMSFGVVLSVFNHLHFRQKYKIYLLFLPELLF 587

  Fly   640 MLCLFGYLVFLIFYKWMSYGGHKPAPYNAACAPSVLITFINMMLMKKEDPVENCLDYMYPNERMI 704
            :|||||||.|:|||||::|...     ::..|||:||.||||.||:     .|....:||.:..:
Zfish   588 LLCLFGYLAFMIFYKWLAYTAR-----DSQLAPSILIHFINMFLMQ-----ANATSPLYPGQMGL 642

  Fly   705 EFALVGIAFCTIPILLAGKPIYLM---RRRRKMQQER----ERDFKRMRRQTIAEMRSTMRYTDD 762
            :..||.:|..::|:||.|||:||.   ...:.:...|    ...::|:||.:..::..::.:.::
Zfish   643 QVFLVVVALLSVPVLLLGKPLYLYWLHHGGKSLGIHRVCLCSCGYERVRRVSEEDLSPSVVHDEE 707

  Fly   763 DNSETSRQKSVDNEEEHEMSEIWIHSGIHTIETVLGSVSHTASYLRLWALSLAHDQLSDVLWHMV 827
            :....|     ...:|.:..::::|..|||||..||.:|:||||||||||||||.|||:|||.||
Zfish   708 EGLSES-----GGPQEFDFGDVFLHQAIHTIEYSLGCISNTASYLRLWALSLAHAQLSEVLWAMV 767

  Fly   828 LTKGFANTLPLYYGVPVLMATFFAWAILTVAILVMMEGLSAFLHTLRLHWVEFQSKFFGGAGESF 892
            :..|...:..|  ||..|:..|..:|:||::||::|||||||||.|||||||||:||:.|||..|
Zfish   768 MRLGLRISSRL--GVIFLVPVFSVFAVLTISILLVMEGLSAFLHALRLHWVEFQNKFYSGAGVKF 830

  Fly   893 KAFNF 897
            ..|:|
Zfish   831 APFDF 835

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-3NP_725837.1 V_ATPase_I 38..897 CDD:279793 307/888 (35%)
atp6v0a2aXP_009303407.1 NtpI 26..833 CDD:224188 306/888 (34%)
V_ATPase_I 28..835 CDD:279793 307/888 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582314
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1269
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - O PTHR11629
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.750

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