DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-3 and atp6v0a2

DIOPT Version :9

Sequence 1:NP_725837.1 Gene:Vha100-3 / 246543 FlyBaseID:FBgn0028669 Length:904 Species:Drosophila melanogaster
Sequence 2:NP_001016223.1 Gene:atp6v0a2 / 548977 XenbaseID:XB-GENE-960957 Length:845 Species:Xenopus tropicalis


Alignment Length:913 Identity:321/913 - (35%)
Similarity:498/913 - (54%) Gaps:105/913 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SFFRSEDMDLCQLLLHTENAFDCLIEVGHHGAVQFNNVYDEDRLLNNLYSKKVTQCYELLRIVDS 77
            ||||||.|.|.||.|.:.:|:||:.|:|..|..:|.::..:.......:..:|.:|.|:.||:..
 Frog     3 SFFRSEAMCLAQLFLQSGSAYDCVSELGEMGLAEFRDLNPQVSAFQRKFVGEVKKCEEMERILGY 67

  Fly    78 LHTYIVQLHVNEIFYPDVDRENRLKEKDLAKY----SDSLKRIHVEASAVTEHYYRLDSRRNRMM 138
            |...|.:.::      .|..|:...|..|.|:    .:.|:::.||...|.::..:|......|:
 Frog    68 LMQEIQKANI------PVPEESLTPEAPLPKHVLDIQEQLQKLEVELREVNKNKEKLQKNLLEMI 126

  Fly   139 EHSFALNKANKYMV-----SDMGSELLYSESTVI---GLVQDATTTSGAYPAHLNYMIGCIRADK 195
            |:::.|...| |:|     .:..:...|.|...:   .|:.  .|......|.|.::.|.:...|
 Frog   127 EYTYMLRVTN-YLVHRSNEHETSAHSTYEEFPALEKESLID--YTCMQRLGAKLGFVSGLVHRAK 188

  Fly   196 FYSFELLLYRLCSFNLIIRFSEMPSPVYEYHYGYKPERVRKFAILMMASSTMIWPKVLKICAHYH 260
            ..|||.:|:|:|....::.:.|:..  |..|...: |..|.|..::......|..||.|||..|.
 Frog   189 LESFEKMLWRVCKGYTVLTYQELDE--YLLHPDTE-EPTRWFVFVVSYWGDQIGQKVKKICECYD 250

  Fly   261 VNIYDCPSSASQREDKVKELSQEIVNVEKVLKEAELMRRQILEVAGRDLFIIRVNLRKALKVYDL 325
            .::|...:||.:|.:.:.||:..|.::.||:.:.:...:|:|..|...::...:.::|...:|.:
 Frog   251 CHLYPYTNSAEERRNLLSELNTRIQDLHKVISQTDDYLKQVLFKASESVYKWVIQIKKMKAIYHV 315

  Fly   326 MNRLRLVGGVEVP-RYLLAEVYIPSSDVPEVEVILRNASRISGGADNIDSSDEDEMNDMKTMPNT 389
            :|..|.    :|. :.|:|||:.|.:|:|.|...|...||.||                      
 Frog   316 LNFCRF----DVTNKCLIAEVWCPVADLPNVRRALEEGSRKSG---------------------- 354

  Fly   390 TPYPIEADFQPLEDMSAGAILLKKNRL-VNHMPPTYFRLNKFTRGFQNLIDAYGMADYKELNPAP 453
                          :|..:.:   ||: .|..|||..|.||||.||||::||||:.:|:|:||||
 Frog   355 --------------VSVPSFI---NRIPSNDTPPTLIRTNKFTSGFQNIVDAYGVGNYREMNPAP 402

  Fly   454 YTIITFPFLFAVMFGDLGHGILLILFSSLMIWKHREIEKYQINATSENEILNILYAGRYIILLMG 518
            ||||||||||||||||.|||||:.||:..|:    ..||....|.|::||:...:.|||||||||
 Frog   403 YTIITFPFLFAVMFGDFGHGILMSLFALCMV----VFEKSPKLARSQDEIMKTFFEGRYIILLMG 463

  Fly   519 VFSVYMGLVYNIVMAKGFNLFGSSWSCRYNETTVYDPAFHVTLDSSHPHFYSGHP---------Y 574
            :||:|.||:||...:|..|:|||||    |.:.::......|.|.|: .|.:.:|         |
 Frog   464 LFSIYTGLIYNDCFSKSMNIFGSSW----NVSAMFSSNVWRTQDLSN-KFLTLNPNVTGVLTGVY 523

  Fly   575 PLGMDPVWAVCGQDSITTTNSLKMKMAIVLGISQMMFGLGLAAANCVLMNRKADLILVVIPQMIF 639
            |:|:||:|:: ..:.::..||.||||:::||:..|.||:.|:|.|.:...::..:.||.||:::|
 Frog   524 PVGIDPIWSL-STNRLSFLNSFKMKMSVILGVIHMTFGVVLSAFNYMHFKKRFCIFLVFIPELLF 587

  Fly   640 MLCLFGYLVFLIFYKWMSYGGHKPAPYNAACAPSVLITFINMMLMKKEDPVENCLDYMYPNERMI 704
            |:|:||||||:|.|||::|     :..::..|||:|:.||||.:..|.|.:    ..::..:..|
 Frog   588 MICIFGYLVFMILYKWLAY-----SAADSRNAPSILLHFINMFMFSKNDQI----PALFTGQVGI 643

  Fly   705 EFALVGIAFCTIPILLAGKPIYLMRRRRKMQQER--ERDFKRMRRQTIAEMRSTMRYTDDDNSET 767
            :..|:.:....:|:||.|||:||..:....|..|  .:.:..:||.:..|: |.:|..|.:..|.
 Frog   644 QIFLIVLVTLCVPVLLFGKPLYLYWQHHGGQTLRNYRKGYTLVRRGSEEEI-SLVRSHDLEEGEI 707

  Fly   768 SRQKSVD---NEEEHEMSEIWIHSGIHTIETVLGSVSHTASYLRLWALSLAHDQLSDVLWHMVLT 829
            :....|.   ::|:.:.:::::...|||||..||.:|:||.|||||||||||.|||:|||.|::.
 Frog   708 NSSHEVQRDRDKEKFDFADVFMSQAIHTIEYCLGCISNTALYLRLWALSLAHAQLSEVLWGMIMR 772

  Fly   830 KGFANTLPLYYGVPVLMATFFAWAILTVAILVMMEGLSAFLHTLRLHWVEFQSKFFGGAGESFKA 894
            ||. |..| ..||.||:..|..:|.||:|||::|||||||||.|||||||||:||:.|||..|..
 Frog   773 KGL-NVEP-SVGVFVLIPLFAVFAFLTIAILLVMEGLSAFLHALRLHWVEFQNKFYTGAGYKFNP 835

  Fly   895 FNF 897
            |:|
 Frog   836 FSF 838

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-3NP_725837.1 V_ATPase_I 38..897 CDD:279793 306/886 (35%)
atp6v0a2NP_001016223.1 NtpI 27..839 CDD:224188 307/889 (35%)
V_ATPase_I 28..838 CDD:279793 306/886 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11629
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.110

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