DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-3 and Vha100-2

DIOPT Version :9

Sequence 1:NP_725837.1 Gene:Vha100-3 / 246543 FlyBaseID:FBgn0028669 Length:904 Species:Drosophila melanogaster
Sequence 2:NP_650722.1 Gene:Vha100-2 / 42216 FlyBaseID:FBgn0028670 Length:834 Species:Drosophila melanogaster


Alignment Length:895 Identity:320/895 - (35%)
Similarity:492/895 - (54%) Gaps:87/895 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 FRSEDMDLCQLLLHTENAFDCLIEVGHHGAVQFNNVYDEDRLLNNLYSKKVTQCYELLRIVDSLH 79
            ||||:|.|||:.:..|.|:..:.|:|..|.|||.::..........:..:|.:|.||.|.:..:.
  Fly     5 FRSEEMALCQMFIQPEAAYTSVSELGETGCVQFRDLNVNVNAFQRKFVTEVRRCDELERKIRYIE 69

  Fly    80 TYIVQLHVNEIFYPDVDRENRLKEKDLAKYSDSLKRIHVEASAVTEHYYRLDSRRN--RMMEHSF 142
            |   ::..:.|..||:       :.|:.:..:..:.|.:||.........::..:|  .|..:..
  Fly    70 T---EIKKDGIVLPDI-------QDDIPRAPNPREIIDLEAHLEKTESEMIELAQNEVNMKSNYL 124

  Fly   143 ALNKANKYMVSDMGSELLYSESTVIGLVQDATTTSGA-------YPAHLNYMIGCIRADKFYSFE 200
            .|.:..|.:.:..|   .:|:..|:.|  |::..:|.       :...|.::.|.|..::.::||
  Fly   125 ELTELRKVLENTQG---FFSDQEVLNL--DSSNRAGGDNDAAAQHRGRLGFVAGVINRERVFAFE 184

  Fly   201 LLLYRLCSFNLIIRFSEMPSPVYEYHYGYKPERVRKFAILMMASSTMIWPKVLKICAHYHVNIYD 265
            .:|:|:...|:.::.|::..|:.:...|:.   :.|...:.......:..::.|:|..:|.::|.
  Fly   185 RMLWRISRGNVFLKRSDLDEPLNDPATGHP---IYKTVFVAFFQGEQLKNRIKKVCTGFHASLYP 246

  Fly   266 CPSSASQREDKVKELSQEIVNVEKVLKEAELMRRQILEVAGRDLFIIRVNLRKALKVYDLMNRLR 330
            ||||.::||:.|:.:...:.:::.||.:.|..|.::|....::|....:.::|...:|..:|...
  Fly   247 CPSSHNEREEMVRNVRTRLEDLKLVLSQTEDHRSRVLATVSKNLPSWSIMVKKMKAIYHTLNLFN 311

  Fly   331 LVGGVEV-PRYLLAEVYIPSSDVPEVEVILRNASRISGGADNIDSSDEDEMNDMKTMPNTTPYPI 394
            :    :| .:.|:.|.::|::|:|.|:..|.:.|...|                .|:|:      
  Fly   312 M----DVTKKCLIGECWVPTNDLPVVQKALSDGSAAVG----------------STIPS------ 350

  Fly   395 EADFQPLEDMSAGAILLKKNRLVNHMPPTYFRLNKFTRGFQNLIDAYGMADYKELNPAPYTIITF 459
               |..:.|             .|..|||:.|.|||||||||||||||:|.|:|.|||.||.|||
  Fly   351 ---FLNVID-------------TNEQPPTFNRTNKFTRGFQNLIDAYGVASYRECNPALYTCITF 399

  Fly   460 PFLFAVMFGDLGHGILLILFSSLMIWKHREIEKYQINATSENEILNILYAGRYIILLMGVFSVYM 524
            ||||||||||||||::|:||.:.|:...|::.:.:    :..||.||.:.|||||||||:|::|.
  Fly   400 PFLFAVMFGDLGHGLILVLFGAWMVLCERKLARIR----NGGEIWNIFFGGRYIILLMGLFAMYT 460

  Fly   525 GLVYNIVMAKGFNLFGSSWSCRYNETTVY-DPAFHVTLDSSHPHFYSGHPYPLGMDPVWAVCGQD 588
            |||||.|.:|..|||||.|...||.|||. :|...:..:||     :...||.||||||.: ..:
  Fly   461 GLVYNDVFSKSMNLFGSRWFNNYNTTTVLTNPNLQLPPNSS-----AVGVYPFGMDPVWQL-ADN 519

  Fly   589 SITTTNSLKMKMAIVLGISQMMFGLGLAAANCVLMNRKADLILVVIPQMIFMLCLFGYLVFLIFY 653
            .|...||.|||::|:.|:..|:||:.::..|.....|.|.:.|..:||::|:|.||||:||::|:
  Fly   520 KIIFLNSFKMKLSIIFGVLHMVFGVCMSVVNFTHFKRYASIFLEFVPQILFLLLLFGYMVFMMFF 584

  Fly   654 KWMSYGGHKP-APYNAACAPSVLITFINMMLMKKEDPVENCLDYMYPNERMIEFALVGIAFCTIP 717
            ||.||..... .|....|||||||.||||||.|..:|.:.|.::|:.::..::.|.|.||.|.||
  Fly   585 KWFSYNARTSFQPETPGCAPSVLIMFINMMLFKNTEPPKGCNEFMFESQPQLQKAFVLIALCCIP 649

  Fly   718 ILLAGKPIYLMRRRRKMQQERERDFKRMRRQTIAEMRSTMRYTDDDNSETSRQKSVDNEEEHEMS 782
            .:|.|||:|: :..||.:.....:.:......:||..:.:......|.|.:  ......::..||
  Fly   650 WMLLGKPLYI-KFTRKNKAHANHNGQLTGNIELAEGETPLPTGFSGNEENA--GGAHGHDDEPMS 711

  Fly   783 EIWIHSGIHTIETVLGSVSHTASYLRLWALSLAHDQLSDVLWHMVLTKGFANTLPLYYGVPVLMA 847
            ||:||..|||||.||.::||||||||||||||||.|||:|||.|||:.|.  .:....|...|..
  Fly   712 EIYIHQAIHTIEYVLSTISHTASYLRLWALSLAHAQLSEVLWQMVLSLGL--KMSGVGGAIGLFI 774

  Fly   848 TFFAWAILTVAILVMMEGLSAFLHTLRLHWVEFQSKFFGGAGESFKAFNF 897
            .|.||.:.|:||||:||||||||||||||||||.|||:.|.|.:|:.|:|
  Fly   775 IFGAWCLFTLAILVLMEGLSAFLHTLRLHWVEFMSKFYEGMGYAFQPFSF 824

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-3NP_725837.1 V_ATPase_I 38..897 CDD:279793 309/870 (36%)
Vha100-2NP_650722.1 V_ATPase_I 28..824 CDD:279793 309/870 (36%)
NtpI 35..825 CDD:224188 307/865 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451296
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1269
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S598
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - P PTHR11629
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.700

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