DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-3 and vph1

DIOPT Version :10

Sequence 1:NP_725837.1 Gene:Vha100-3 / 246543 FlyBaseID:FBgn0028669 Length:904 Species:Drosophila melanogaster
Sequence 2:NP_594219.2 Gene:vph1 / 2542310 PomBaseID:SPAC16E8.07C Length:831 Species:Schizosaccharomyces pombe


Alignment Length:923 Identity:279/923 - (30%)
Similarity:438/923 - (47%) Gaps:138/923 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SFFRSEDMDLCQLLLHTENAFDCLIEVGHHGAVQFNNVYDEDRLLNNLYSKKVTQCYELLRIVDS 77
            |.||||::.|.||.|.||:|...:..:|....:.|.::..:.......:.:::.:..:..|::..
pombe     4 SLFRSEEVSLVQLYLPTESARPIMSALGELSTIHFKDLNPDVVAFQRSFVREIRRLTDTERLLRY 68

  Fly    78 LHTYIVQLHVNEIFYPD----VDRENRLKEKDLAKYSDSLKRIHVEASAVTEHYYRLDSRRNRMM 138
            ||:   ::.:|.|..||    ...|:.|:...:....:.:.|:......:.|....|::|..:.:
pombe    69 LHS---EIDLNGIHVPDHNLPPSYESVLESSTIEDIIERITRLEARVRQLVESSQLLEARYLQQL 130

  Fly   139 EHSFALNKA---------------NKYMVSDMGSELLYSESTVIGLVQDATT--TSGAYPAH--- 183
            |.:..|.||               |.|..|.:.|.   .:.|...|:::|..  |:|.:.:.   
pombe   131 EFANVLTKADAFFSKSGNTVDPLRNNYETSSIFSG---EDDTTAPLIENALELGTTGTFDSEETS 192

  Fly   184 ------LNYMIGCIRADKFYSFELLLYRLCSFNLIIRFSEMPSPVYEYHYGYKPERVRKFAILMM 242
                  |:::.|.|...||...|.:|:|....||.|.  ::.:.....|...|.|  .|...|::
pombe   193 PQMNTTLDFVSGIIPTVKFQFLERILWRTLRGNLFIH--QVRADDSLIHGAEKNE--EKTIFLVI 253

  Fly   243 ASSTMIWPKVLKICAHYHVNIYDCPSSASQREDKVKELSQEIVNVEKVLKEAELMRRQILEVAGR 307
            |..|.|..::.||.......::.....|..|..::::.:..|.::..||:.........|.....
pombe   254 AHGTQILLRIRKISESLGATLFPVEEDAPGRTSQIQQANVSISDLNAVLENTRSALYTELTFIAE 318

  Fly   308 DLFIIRVNLRKALKVYDLMNRLRLVGGVEVPRYLLAEVYIPSSDVPEVEVILRNASRISGGADNI 372
            .:......|.|...|:.:||   |....:..:.|:||.:.|::::|.|:..|||.|      |..
pombe   319 HISAWEAVLHKDKTVFQVMN---LFNYDQNHKCLIAEGWCPTANLPMVQKTLRNIS------DLT 374

  Fly   373 DSSDEDEMNDMKTMPNTTPYPIEADFQPLEDMSAGAILLKKNRLVNHMPPTYFRLNKFTRGFQNL 437
            ||.....:|.:.|                                :..||||||:||||.|||::
pombe   375 DSQAPTILNVVHT--------------------------------SEQPPTYFRVNKFTEGFQSI 407

  Fly   438 IDAYGMADYKELNPAPYTIITFPFLFAVMFGDLGHGILLILFSSLMIWKHREIEKYQINATSE-N 501
            ||:||:|.|:|:|.....|:|||||||:||||||||.::...:.:.:     :.:..:.|..: :
pombe   408 IDSYGIATYREVNHGIVAIVTFPFLFAIMFGDLGHGAIMASVALMFV-----LYEKTLGAKKDLD 467

  Fly   502 EILNILYAGRYIILLMGVFSVYMGLVYNIVMAKGFNLFGSSWSCRYNETTVYDPAFHVTLDSSHP 566
            ||:.:::.||||:||||:||:|:|.|||.:.:|..::|.|.|            .:.|..:.:..
pombe   468 EIVGMVFYGRYIVLLMGLFSMYVGFVYNDLFSKPMSIFSSRW------------VWPVKSEEAIA 520

  Fly   567 HFYSGHPYPLGMDPVWAVCGQDSITTTNSLKMKMAIVLGISQMMFGLGLAAANCVLMNRKADLIL 631
            .......||:|:||.|. ...:::...||.|||::|:||:..|.|.|.|:.:|.....||.|:..
pombe   521 RAVQVGTYPIGIDPTWH-SADNNLLFMNSYKMKLSIILGVIHMTFCLFLSLSNYRFFKRKLDIYA 584

  Fly   632 VVIPQMIFMLCLFGYLVFLIFYKW-MSYGGHKPAPYNAACAPSVLITFINMMLMKKEDP--VENC 693
            |.:|.:||:..:|||||..|.||| :.:......|      ||:|    ||:::....|  :|  
pombe   585 VFVPSLIFLEAIFGYLVITIVYKWCIDWKAKDLQP------PSLL----NMLILMFLSPGTLE-- 637

  Fly   694 LDYMYPNERMIEFALVGIAFCTIPILLAGKPIYLMRRRRKMQQERERDFKRMRRQTIAEMRSTMR 758
             |.:||.::.::..||..|...:|.||..||..|.||....:.:.:            .:.|.:.
pombe   638 -DQLYPGQKYLQVGLVIAALICVPWLLIVKPFVLWRRHSNEENKYQ------------SLNSDLP 689

  Fly   759 YTDDDNSETSRQKSVDNEEEH----EMSEIWIHSGIHTIETVLGSVSHTASYLRLWALSLAHDQL 819
            ..|    |.....:||::|:.    |:.|:.||..|||||..||.|||||||||||||||||:||
pombe   690 NVD----EADALMAVDSQEKQAEPFELGEVVIHQVIHTIEFCLGCVSHTASYLRLWALSLAHNQL 750

  Fly   820 SDVLWHMVLTKGFANTLPLYYGVPVLMATFFAWAILTVAILVMMEGLSAFLHTLRLHWVEFQSKF 884
            |.|||:|.|..||..|  ...|...::..|..|.|.|..:||.|||.||.||:|||||||..||.
pombe   751 SSVLWNMTLANGFRMT--GIVGSIFVVILFGFWFIATCVVLVAMEGTSAMLHSLRLHWVEGMSKH 813

  Fly   885 FGGAGESFKAFNF 897
            |.|.|.:|..|.|
pombe   814 FEGEGYAFTPFTF 826

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-3NP_725837.1 V_ATPase_I 38..897 CDD:460232 266/896 (30%)
vph1NP_594219.2 V_ATPase_I 28..826 CDD:460232 266/897 (30%)

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