DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-3 and atp6v0a1

DIOPT Version :9

Sequence 1:NP_725837.1 Gene:Vha100-3 / 246543 FlyBaseID:FBgn0028669 Length:904 Species:Drosophila melanogaster
Sequence 2:XP_031749790.1 Gene:atp6v0a1 / 100036694 XenbaseID:XB-GENE-959346 Length:871 Species:Xenopus tropicalis


Alignment Length:914 Identity:322/914 - (35%)
Similarity:493/914 - (53%) Gaps:114/914 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 FRSEDMDLCQLLLHTENAFDCLIEVGHHGAVQFNNVYDEDRLLNNLYSKKVTQCYEL---LRIVD 76
            ||||:|.|.||.|.:|.|:.|:.|:|..|.|||.::..:..:....:..:|.:|.|:   ||.|:
 Frog    31 FRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEEMDRKLRFVE 95

  Fly    77 ----SLHTYIVQLHVN-EIFYPDVDRENRLKEKDLAKYSDSLKRIHVEASAVTEHYYRLDSRRNR 136
                ..:..|:....| |:.:|          :|:.....:.::|.:|...:..:...|......
 Frog    96 KEVKKANISILDTGENPEVPFP----------RDMIDLEANFEKIEIELKEINTNQEALKRNFLE 150

  Fly   137 MMEHSFALNKANKYM-------VSDMGSELLYSESTVIGLVQDATTTSGAYPAHLNYMIGCIRAD 194
            :.|..|.|.|..::.       ...|....|..||:  .|::.:....|| |..|.::.|.|..:
 Frog   151 LTELKFILRKTQQFFDEAQLHHHQQMADPDLLEESS--SLLEPSEMGRGA-PLRLGFVAGVINRE 212

  Fly   195 KFYSFELLLYRLCSFNLIIRFSEMPSPVYEYHYGYKPERVRKFAILMMASSTMIWPKVLKICAHY 259
            :..:||.:|:|:|..|:.:|.:|:.:|:.:...|   :.|.|...::......:..:|.|||..:
 Frog   213 RIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTG---DSVHKSVFIIFFQGDQLKNRVKKICEGF 274

  Fly   260 HVNIYDCPSSASQREDKVKELSQEIVNVEKVLKEAELMRRQILEVAGRDLFIIRVNLRKALKVYD 324
            ..::|.||.:..:|::....::..|.:::.||.:.|..|:::|:.|.:.|.:..:.:||...:|.
 Frog   275 RASLYPCPETPQERKEMATGVNTRIEDLQMVLNQTEDHRQRVLQAAAKSLRVWFIKVRKMKAIYH 339

  Fly   325 LMNRLRLVGGVEV-PRYLLAEVYIPSSDVPEVEVILRNASRISGGADNIDSSDEDEMNDMKTMPN 388
            .:|    :..::| .:.|:|||:.|.:|:..::..||..:..||                    :
 Frog   340 TLN----LCNIDVTQKCLIAEVWCPVADLDSIQFALRRGTEHSG--------------------S 380

  Fly   389 TTPYPIEADFQPLEDMSAGAILLKKNRL-VNHMPPTYFRLNKFTRGFQNLIDAYGMADYKELNPA 452
            |.|                :||   ||: .|..||||.:.||||.|||||:||||:..|:|:|||
 Frog   381 TVP----------------SIL---NRMQTNQTPPTYNKTNKFTYGFQNLVDAYGIGSYREINPA 426

  Fly   453 PYTIITFPFLFAVMFGDLGHGILLILFSSLMIWKHREIEKYQINATSENEILNILYAGRYIILLM 517
            |||||||||||||||||.|||||:.||:..|:.:...|...:|    :||:..::::||||||||
 Frog   427 PYTIITFPFLFAVMFGDFGHGILMTLFAVWMVVRESRILSQKI----DNELFTMMFSGRYIILLM 487

  Fly   518 GVFSVYMGLVYNIVMAKGFNLFGSSWSCR--YNETTVYDPAFHVTLDSSHPH---FYSGHPYPLG 577
            |:||:|.||:||...:|..||||||||.|  :.:|...|...|.::...:|:   .::| |||.|
 Frog   488 GLFSIYTGLIYNDCFSKALNLFGSSWSVRPMFTDTWSEDLLKHTSVLQLNPNVTGVFNG-PYPFG 551

  Fly   578 MDPVWAVCGQDSITTTNSLKMKMAIVLGISQMMFGLGLAAANCVLMNRKADLILVVIPQMIFMLC 642
            :||:|:: ..:.:|..||.||||::||||..|.||:.|:..|.:...:..::.|..||:||||..
 Frog   552 IDPIWSL-ATNKLTFLNSFKMKMSVVLGIIHMTFGVALSLLNHIYFKKPLNIYLGFIPEMIFMTT 615

  Fly   643 LFGYLVFLIFYKWMSYGGHKPAPYNAACAPSVLITFINMMLMKKEDPVENCLDYMYPNERMIEFA 707
            ||||||.||.|||.:|...     .:..|||:||.||||.|...:|   ..|..:|..:..::..
 Frog   616 LFGYLVILIIYKWCAYDAS-----TSMVAPSLLIHFINMFLFSYQD---TSLPMLYKGQMGLQCF 672

  Fly   708 LVGIAFCTIPILLAGKPIYLMRRRRKMQQERERDFKRMRRQTIAEMRSTMRYTDDDNSETSR-QK 771
            ||..|...:|.:|..||:.|  ||:.:::      |.:.......:|.....|::|...... |.
 Frog   673 LVVCAIICVPWMLVVKPLIL--RRQYLRR------KHLGTHNFGGIRVGNGPTEEDAEIIQHDQL 729

  Fly   772 SVDNEEEHE--MSEIW------IHSGIHTIETVLGSVSHTASYLRLWALSLAHDQLSDVLWHMVL 828
            |:.:||..|  |.|::      :|..|||||..||.:|:||||||||||||||.|||:|||.||:
 Frog   730 SMHSEEGEEPAMEEVFDFGDTVVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVM 794

  Fly   829 TKGFANTLPLYYGVPVLMATFFAWAILTVAILVMMEGLSAFLHTLRLHWVEFQSKFFGGAGESFK 893
            ..|.  ::....|...|:..|.|:|.||:|||::|||||||||.|||||||||:||:.|.|..|.
 Frog   795 HVGL--SIRSLGGGIALVFVFSAFATLTIAILLIMEGLSAFLHALRLHWVEFQNKFYMGTGFKFL 857

  Fly   894 AFNF 897
            .|:|
 Frog   858 PFSF 861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-3NP_725837.1 V_ATPase_I 38..897 CDD:279793 309/889 (35%)
atp6v0a1XP_031749790.1 V_ATPase_I 53..861 CDD:396194 309/890 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11629
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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