Sequence 1: | NP_001261024.1 | Gene: | Sema2b / 246538 | FlyBaseID: | FBgn0264273 | Length: | 824 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_684379.3 | Gene: | sema5ba / 556471 | ZFINID: | ZDB-GENE-070912-187 | Length: | 1101 | Species: | Danio rerio |
Alignment Length: | 743 | Identity: | 231/743 - (31%) |
---|---|---|---|
Similarity: | 345/743 - (46%) | Gaps: | 126/743 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 89 LYYEPPCCTGSS---AAHHLR---HHKEH-----------VQDFS-CGPLHYKTFYMDERNNALY 135
Fly 136 VGAMDRIFRLNLRNISQSICERDVLILEPT--GSD---ILNCVSKGKREKVECRNHIRVIQPMNF 195
Fly 196 NGQKLYVCGTNAHNPKDYVINA-NLTH-LPRSQYVPGIGLGIGKCPYDPADNSTAVYVENGNPFG 258
Fly 259 LPALYAGTNAEFTKADSVIFRSDLYNLTNGRKEANFKRTVKYDSKLLDKPNFVGSFEIGEFVYFF 323
Fly 324 FREHAVEYINCGKAVYSRVARVCKNDRGGKYMISQNWATYLKARMNCSISSEFPFYFNEIQSVYK 388
Fly 389 MPTDDTKFYATFTTNTNGLIGSAVCSYDIRDINAAFDGKFKEQATSNSAWLPVLNSKVPEPRPGT 453
Fly 454 CHND--TATLPDSVLNFIRKHPLMDKAVDHEFGNPVFFKRDVILTKLVVDKIRIDKLNQEFL--V 514
Fly 515 YFVATTSGHIYKIVQFMHYGQRHSNLVDIFEASPH-SEPIREMTLSHKTGSLYVATDHQVKQIDI 578
Fly 579 AMCARRYDSCFRCVS--DPYCGWDKDVNACRPYQLGLLQDVANETSGICDTSV--LRKKVT-SSY 638
Fly 639 GQTLHLSCFVKMPEVLRKKQTRWYHHSTEKG--------RYEVRYTPTKYIDTN--EGGLVLLAV 693
Fly 694 NEGDGG--RYDSYLDGTLLCSYGVTVDAHRCSPPSQKQD-----YQKIYSHWCNEFEK-----YK 746
Fly 747 SAMKQWQAKQEQCGLKDKTGPISSNGKH 774 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema2b | NP_001261024.1 | Sema_2A | 120..579 | CDD:200499 | 172/470 (37%) |
Ig | 632..720 | CDD:299845 | 16/100 (16%) | ||
sema5ba | XP_684379.3 | Sema | 72..508 | CDD:301699 | 175/476 (37%) |
PSI | 509..556 | CDD:279745 | 13/52 (25%) | ||
TSP1 | 567..618 | CDD:214559 | 8/67 (12%) | ||
TSP1 | 621..674 | CDD:214559 | 11/52 (21%) | ||
TSP1 | 679..725 | CDD:214559 | 6/29 (21%) | ||
TSP1 | 808..860 | CDD:214559 | |||
TSP1 | 871..917 | CDD:214559 | |||
TSP1 | 920..960 | CDD:214559 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |