Sequence 1: | NP_001261024.1 | Gene: | Sema2b / 246538 | FlyBaseID: | FBgn0264273 | Length: | 824 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001012078.2 | Gene: | Sema4a / 310630 | RGDID: | 1304636 | Length: | 762 | Species: | Rattus norvegicus |
Alignment Length: | 683 | Identity: | 191/683 - (27%) |
---|---|---|---|
Similarity: | 297/683 - (43%) | Gaps: | 134/683 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 84 ENTWNL----YYE-------PPC--CTGSSAAHHLRHH------------KEHVQDFSCGPLHYK 123
Fly 124 TFYMDERNNALYVGAMDRIFRLNLRNISQSICERDVLILEPTGSDILN-CVSKGKREKVECRNHI 187
Fly 188 RVIQPMNFNGQKLYVCGTNAHNPKDYVINANLTHLPRSQYVP----GIGLGIGKCPYDPADNSTA 248
Fly 249 VYVENGNPFGLPALYAGTNAEFTKADSVIFRSDLYNLTNGR----KEANFKRTVKYDSKLLDKPN 309
Fly 310 FVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYMISQNWATYLKARMNCSISS 374
Fly 375 EFPFYFNEIQSVYKMPTDD---TKFYATFTT--NTNGLIGSAVCSYDIRDINAAFDGKFKEQATS 434
Fly 435 NSAWLPVLNSKVPEPRPGTCHNDTATLPDSVLNFIRKHPLMDKAVDHEFGNPVFFKRDVILTKLV 499
Fly 500 VDKIR-IDKLNQEFLVYFVATTSGHIYKIVQFMHYGQRHS-NLVDIFEASPHSEPIREMTLSHKT 562
Fly 563 GSLYVATDHQVKQIDIAMCARRYDSCFRCV--SDPYCGWDKDVNACRPYQLGLL--------QDV 617
Fly 618 -ANETSGIC------------DTSVLRKKVTSSYGQTLHLSCFVKMPEVLRKKQTRWYHHSTEKG 669
Fly 670 RYEV-RYTPTKYIDTNEGGLVLLAVNEGDGGRY 701 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema2b | NP_001261024.1 | Sema_2A | 120..579 | CDD:200499 | 146/474 (31%) |
Ig | 632..720 | CDD:299845 | 18/71 (25%) | ||
Sema4a | NP_001012078.2 | Sema | 57..497 | CDD:301699 | 148/488 (30%) |
PSI | 498..542 | CDD:214655 | 16/49 (33%) | ||
Ig | 567..639 | CDD:299845 | 18/71 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
5 | 4.870 |