Sequence 1: | NP_001261024.1 | Gene: | Sema2b / 246538 | FlyBaseID: | FBgn0264273 | Length: | 824 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006244820.1 | Gene: | Sema4c / 301346 | RGDID: | 1562837 | Length: | 856 | Species: | Rattus norvegicus |
Alignment Length: | 683 | Identity: | 214/683 - (31%) |
---|---|---|---|
Similarity: | 313/683 - (45%) | Gaps: | 103/683 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 84 ENTWNLYYEPPCCTGSSAAHHLRHHKEHVQDFSCGPLHYKTFYMDERNNALYVGAMDRIFRLNLR 148
Fly 149 NISQSICERDVLILEPTGSDILNCVSKGKREKVECRNHIRVIQPMNFNGQKLYVCGTNAHNPKDY 213
Fly 214 VINANLTHLPRSQYVPGIGLGIGKCPYDPADNSTAVYVENGNPFGLPALYAGTNAEFTKADSVIF 278
Fly 279 RSDLYNLTNGRKEANFKRTVKYDSKLLDKPNFVGSF----EIGEF------VYFFFREHAVEYIN 333
Fly 334 CGKAVYSRVARVCKNDRGGKYMISQNWATYLKARMNCSISSEFPFYFNEIQSVYKM---PTDDTK 395
Fly 396 FYATFTTNTNGLIGSAVCSYDIRDINAAFDGKFKEQATSNSAWLPVLNSKVPEPRPGTC----HN 456
Fly 457 D-----TATLPDSVLNFIRKHPLMDKAVDHEFGNPVFFKRDVILTKLVVDKI-RIDKLNQEFLVY 515
Fly 516 FVATTSGHIYKIVQ---FMHYGQRHSNLVDIFEASPHSEPIREMTLSHKTGSLYVATDHQVKQID 577
Fly 578 IAMCARRYDSCFRCV--SDPYCGWDKDVNACRPYQLG------LLQDVAN-ETSGIC-------D 626
Fly 627 TSVLRKKVTSSYGQTLHLSCFVKMPEVLRKKQTRWYHHSTEKGRYEVRYTPTKYI-DTNEGGLVL 690
Fly 691 LAVNEGDGGRYDSYLD--GTLLC--SYGVTVDA 719 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema2b | NP_001261024.1 | Sema_2A | 120..579 | CDD:200499 | 155/484 (32%) |
Ig | 632..720 | CDD:299845 | 27/93 (29%) | ||
Sema4c | XP_006244820.1 | Sema_4C | 64..520 | CDD:200519 | 159/500 (32%) |
PSI | 521..>550 | CDD:214655 | 13/31 (42%) | ||
IG_like | 585..659 | CDD:214653 | 21/81 (26%) | ||
Ig | 586..670 | CDD:299845 | 26/91 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
5 | 4.870 |