Sequence 1: | NP_001261024.1 | Gene: | Sema2b / 246538 | FlyBaseID: | FBgn0264273 | Length: | 824 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_008760867.1 | Gene: | Sema3c / 296787 | RGDID: | 1309343 | Length: | 760 | Species: | Rattus norvegicus |
Alignment Length: | 800 | Identity: | 218/800 - (27%) |
---|---|---|---|
Similarity: | 330/800 - (41%) | Gaps: | 179/800 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 95 CCTGSSAAH--------HLRHHK-------EHVQDFSCGPLHYKTFYMDERNNALYVGAMDRIFR 144
Fly 145 LNLRNISQSICERDVLILEPTGS-DILNCVSKGKREKVECRNHIRVIQPMNFNGQKLYVCGTNAH 208
Fly 209 NPKDYVINANLTHLPRSQYVPG--------IGLGIGKCPYDPADNSTAVYVENGNPFGLPALYAG 265
Fly 266 TNAEFTKADSVIFRSDLYNLTNGRKEANFKRTVKYDSKLLDKPNFVGSFEIGE-------FVYFF 323
Fly 324 FREHAVEYINCGKAVYSRVARVCKNDRGGKYMISQNWATYLKARMNCSISSEF--PFYFNEIQSV 386
Fly 387 YKMPTDD---TKFYATFTTNTNGLIGSAVCSYDIRDINAAFDGKFKEQATSNSAWLPVLNSKVPE 448
Fly 449 PRPGTC--------HNDTATLPDSVLNFIRKHPLMDKAVDHEFGNPVFFK--RDVILTKLVVDKI 503
Fly 504 RIDKLNQEFLVYFVATTSGHIYKIVQFMHYGQRHSNLV-DIFEASPHSEPIREMTLSHKTGSLYV 567
Fly 568 ATDHQVKQIDIAMCARRYDSCFRC--VSDPYCGWD-----------------KDV------NACR 607
Fly 608 PYQLGLLQDVANETSGICDTSVLRKKVTSSYG---QTLHLSCFVKMPEVLRKKQTRWYHHSTEKG 669
Fly 670 RYEVRYTPTKYIDTNEGGLVLLAVNEGDGGRY------DSY------LDGTLLCSYGVTVDAHRC 722
Fly 723 SP----------PSQKQDYQKIYSH--------WCNEFEKYKSAMKQWQAKQEQCGLKDKTGPIS 769
Fly 770 SNGKHVNDVFSNDALVXPRK 789 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema2b | NP_001261024.1 | Sema_2A | 120..579 | CDD:200499 | 155/490 (32%) |
Ig | 632..720 | CDD:299845 | 23/102 (23%) | ||
Sema3c | XP_008760867.1 | Sema_3C | 51..520 | CDD:200512 | 157/505 (31%) |
PSI | 519..556 | CDD:214655 | 9/36 (25%) | ||
Ig_Semaphorin_classIII | 584..673 | CDD:143279 | 20/106 (19%) | ||
IG_like | 588..662 | CDD:214653 | 19/91 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.910 |