Sequence 1: | NP_001261024.1 | Gene: | Sema2b / 246538 | FlyBaseID: | FBgn0264273 | Length: | 824 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001163933.1 | Gene: | Sema4b / 293042 | RGDID: | 1307872 | Length: | 821 | Species: | Rattus norvegicus |
Alignment Length: | 899 | Identity: | 238/899 - (26%) |
---|---|---|---|
Similarity: | 359/899 - (39%) | Gaps: | 221/899 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 53 GKGKHRLCSLSAL-LLVLVAQTVHVEYARADYENTWNLYYEPPCCTGSSAAHHLRHHKEHVQDFS 116
Fly 117 CGPL-HYKTFYMDERNNALYVGAMDRIFRLNLRNISQSICERDVLILEPTG--SDIL-------- 170
Fly 171 -NCVSKGKREKVECRNHIRVIQPMNFNGQKLYVCGTNAHNPKDYVINANLTHLPRSQYVPGIGL- 233
Fly 234 --GIGKCPYDPADNSTAVYVENGNPFGLPALYAGTNAEFTKADSVIFRSDLYNLTNGRKEANFKR 296
Fly 297 TVKYDSKL--LDKPNFVGSFEIGEF----------VYFFFREHAVEYINCGKAVYSRVARVCKND 349
Fly 350 RGGKYMISQNWATYLKARMNCSISSE-FPFYFNEIQSVYKM---PTD--DTKFYATFTT--NTNG 406
Fly 407 LIGSAVCSYDIRDINAAFDGKFKEQATSNSAWLPVLNSKVPEPRPGTC---------HNDTATLP 462
Fly 463 DSVLNFIRKHPLMDKAVDHEFGNPVFFKRDVILTKLVVDKIRIDKLNQEFLVYFVATTSGHIYKI 527
Fly 528 VQFMHYGQRHSNLVDIFEASPHSEPIREMTLSHKTGSLYVATDHQVKQIDIAMCARRYDSCFRCV 592
Fly 593 --SDPYCGWD-----------KDVNACRPYQLGLLQDV--ANETSGICDTSVLR----------K 632
Fly 633 KVTSSYGQTLHLSCFVKMPEVLRKKQTR-WYHHSTE-KGRYEVRYTPTKYIDTNEGGLVLLAVNE 695
Fly 696 G----------DGGR--YDSYL---------------DGTLLCSYGVTVDAHRCSPPS-QKQDYQ 732
Fly 733 KIYSHWCNEF-------------------EKYKSAMKQWQAKQEQCGLKDKTGP--ISSNGKHVN 776
Fly 777 DVFSNDALVXPRKYLYSFEFLSSATEG----VASAHRKLYI---FVFVLTIFAR 823 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema2b | NP_001261024.1 | Sema_2A | 120..579 | CDD:200499 | 150/502 (30%) |
Ig | 632..720 | CDD:299845 | 23/116 (20%) | ||
Sema4b | NP_001163933.1 | Sema | 46..509 | CDD:417757 | 151/508 (30%) |
PSI | 510..556 | CDD:396154 | 15/51 (29%) | ||
Ig_Sema4B_like | 577..661 | CDD:409456 | 19/95 (20%) | ||
Ig strand B | 590..594 | CDD:409456 | 1/3 (33%) | ||
Ig strand C | 602..606 | CDD:409456 | 2/3 (67%) | ||
Ig strand E | 624..627 | CDD:409456 | 1/2 (50%) | ||
Ig strand F | 637..642 | CDD:409456 | 0/4 (0%) | ||
Ig strand G | 654..657 | CDD:409456 | 1/2 (50%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |