Sequence 1: | NP_001261024.1 | Gene: | Sema2b / 246538 | FlyBaseID: | FBgn0264273 | Length: | 824 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001230001.1 | Gene: | Sema3a / 20346 | MGIID: | 107558 | Length: | 772 | Species: | Mus musculus |
Alignment Length: | 812 | Identity: | 226/812 - (27%) |
---|---|---|---|
Similarity: | 341/812 - (41%) | Gaps: | 189/812 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 79 ARADYENTWNLYYEPPCCTGSSAAHHLR-HHKEHVQDFS-------CGPLHYKTFYMDERNNALY 135
Fly 136 VGAMDRIFRLNLRNISQ--------SICERDVLILEPTGSDILNCVSKGKREKVECRNHIRVIQP 192
Fly 193 MNFNGQKLYVCGTNA-----------HNPKDYVINANLTHLPRSQYVPGIGLGIGKCPYDPADNS 246
Fly 247 TAVYVENGNPFGLPALYAGTNAEFTKADSVIFRSDLYNLTNGRKEANFKRTVKYDSKLLDKPNFV 311
Fly 312 GSFEIGEF-------VYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYMISQNWATYLKARMN 369
Fly 370 CSI--SSEFPFYFNEIQSVYKMPTDDTK---FYATFTTNTNGLIGSAVCSYDIRDINAAFDGKFK 429
Fly 430 EQATSNSAWLPVLNSKVPEPRPGTC-------HNDTATLPDSVLNFIRKHPLMDKAVDHEFGNPV 487
Fly 488 FFKRDV--ILTKLVVDKIRIDKLNQEFLVYFVATTSGHIYKIVQFMHYGQRHSNLVDIFEASPHS 550
Fly 551 EP--IREMTLSHKTGSLYVATDHQVKQIDIAMCARRYDSCFRC--VSDPYCGWDKDVNACRPY-- 609
Fly 610 ---QLGLLQDVANETSGICDTSVLRKKVTSSYGQTL---------HLSCFVKMPEVLRKKQTRW- 661
Fly 662 YHHSTEKGRYEVRYTPTKYIDTNEGGLVLLAVNEGDGGRYDSYLDGTLLC---SYG-------VT 716
Fly 717 VDA----------HR--------------CSPPSQK---QDYQKIYSH--------WCNEFEKYK 746
Fly 747 SAMKQWQAKQEQCGLKDKTGPISSN-GKHVND 777 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema2b | NP_001261024.1 | Sema_2A | 120..579 | CDD:200499 | 165/500 (33%) |
Ig | 632..720 | CDD:299845 | 21/117 (18%) | ||
Sema3a | NP_001230001.1 | Sema_3A | 26..518 | CDD:200510 | 168/532 (32%) |
PSI | 516..>552 | CDD:214655 | 11/37 (30%) | ||
Ig_Sema3 | 580..671 | CDD:409455 | 20/100 (20%) | ||
Ig strand B | 594..598 | CDD:409455 | 1/3 (33%) | ||
Ig strand C | 606..610 | CDD:409455 | 0/3 (0%) | ||
Ig strand E | 633..637 | CDD:409455 | 2/3 (67%) | ||
Ig strand F | 647..652 | CDD:409455 | 3/12 (25%) | ||
Ig strand G | 664..667 | CDD:409455 | 2/2 (100%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 729..772 | 6/25 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 51 | 1.000 | Domainoid score | I11477 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.910 |