DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sema2b and LOC1277221

DIOPT Version :10

Sequence 1:NP_001261024.1 Gene:Sema2b / 246538 FlyBaseID:FBgn0264273 Length:824 Species:Drosophila melanogaster
Sequence 2:XP_061506710.1 Gene:LOC1277221 / 1277221 VectorBaseID:AGAMI1_011129 Length:741 Species:Anopheles gambiae


Alignment Length:726 Identity:494/726 - (68%)
Similarity:599/726 - (82%) Gaps:20/726 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 LVLVAQTVHVEYAR---ADYENTWNLYYEPPCC-TGSS--------AAHHLRHHKEHVQDFSCGP 119
            |||....|.::..|   .|||||||.|||.||| :|.|        ..||||||::||::|.||.
Mosquito    19 LVLTVAFVLLQLLRPGAGDYENTWNFYYEQPCCGSGQSNVGGISINGQHHLRHHRDHVREFQCGK 83

  Fly   120 LHYKTFYMDERNNALYVGAMDRIFRLNLRNISQSICERDVLILEPTGSDILNCVSKGKREKVECR 184
            .:|:|||:||..:.||||||||:|:|||:|:|.:.||||.::|:||.|||.|||||||.|..:|:
Mosquito    84 FYYRTFYLDEERDTLYVGAMDRVFKLNLKNVSMTSCERDTIVLDPTSSDIRNCVSKGKSEMFDCK 148

  Fly   185 NHIRVIQPMNFNGQKLYVCGTNAHNPKDYVINANLTHLPRSQYVPGIGLGIGKCPYDPADNSTAV 249
            |||||||||: :|.:||:||||||||||.||.:||||||||:|||||||||.||||||.|||||:
Mosquito   149 NHIRVIQPMD-SGNRLYICGTNAHNPKDLVIYSNLTHLPRSEYVPGIGLGIAKCPYDPYDNSTAI 212

  Fly   250 YVENGNPFGLPALYAGTNAEFTKADSVIFRSDLYNLTNGRKEANFKRTVKYDSKLLDKPNFVGSF 314
            |||.|||..|||||:||||||||||:||||:||||:|.|:|..|||||:|||||.||||||||||
Mosquito   213 YVEQGNPGDLPALYSGTNAEFTKADTVIFRTDLYNMTTGKKVFNFKRTLKYDSKWLDKPNFVGSF 277

  Fly   315 EIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYMISQNWATYLKARMNCSISSEFPFY 379
            :|||.|||||||.||||||||||||||||||||.|.|||.:::||||||||||:|||||.|||||
Mosquito   278 DIGEHVYFFFRETAVEYINCGKAVYSRVARVCKKDTGGKNILNQNWATYLKARINCSISGEFPFY 342

  Fly   380 FNEIQSVYKMPTDDTKFYATFTTNTNGLIGSAVCSYDIRDINAAFDGKFKEQATSNSAWLPVLNS 444
            |||||.||::|||.|||||||||:||||:||||||:||.:|:.||.|||||||:|||||||||||
Mosquito   343 FNEIQDVYQLPTDKTKFYATFTTSTNGLVGSAVCSFDINEIHGAFAGKFKEQASSNSAWLPVLNS 407

  Fly   445 KVPEPRPGTCHNDTATLPDSVLNFIRKHPLMDKAVDHEFGNPVFFKRDVILTKLVVDKIRIDKLN 509
            |:||||||||.|||:|||||||||||.||||||||:||..|||::|||::.||||||||:|:.|:
Mosquito   408 KIPEPRPGTCVNDTSTLPDSVLNFIRSHPLMDKAVNHEHNNPVYYKRDLVFTKLVVDKIKIEILS 472

  Fly   510 QEFLVYFVATTSGHIYKIVQFMHYGQRHSNLVDIFEASPHSEPIREMTLSHKTGSLYVATDHQVK 574
            ||:.|:::.|.:|.||||||::..|:..|.|:||||.: .:|.|:.|.||.|..|||||||:::|
Mosquito   473 QEYTVFYIGTNAGRIYKIVQYLRNGESKSKLLDIFEIA-QNEAIQVMELSQKRKSLYVATDYRIK 536

  Fly   575 QIDIAMCARRYDSCFRCVSDPYCGWDKDVNACRPYQLGLLQDVANETSGICDTSVLRKKVTSSYG 639
            |||:|||.||||:|||||.|||||||||.:.|:||:.||||||.|||..|||||||:||:..:||
Mosquito   537 QIDLAMCNRRYDNCFRCVKDPYCGWDKDTSTCKPYEPGLLQDVGNETYDICDTSVLKKKIIVTYG 601

  Fly   640 QTLHLSCFVKMPEVLRKKQTRWYHHSTEKGRYEVRYTPTKYIDTNEGGLVLLAVNEGDGGRYDSY 704
            |::||.||||:||:|:.:...|||||.||||||::|.|||||:|.|.|||:::|||.||||||.:
Mosquito   602 QSVHLGCFVKIPEILKDQTVTWYHHSKEKGRYEIKYNPTKYIETTERGLVVISVNEADGGRYDCH 666

  Fly   705 LDGTLLCSYGVTVDAHRCSPPSQKQDYQKIYSHWCNEFEKYKSAMKQWQAKQEQCGLKDKTGPIS 769
            |.|:|||||.:|||||||:||::..|||||||.||:||||||||||.|:.||.||..:      :
Mosquito   667 LGGSLLCSYNITVDAHRCTPPNKTNDYQKIYSDWCHEFEKYKSAMKTWEKKQAQCSRQ------N 725

  Fly   770 SNGKHVNDVFS 780
            .:.:|.||||:
Mosquito   726 YSNQHPNDVFA 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sema2bNP_001261024.1 Sema_2A 120..579 CDD:200499 333/458 (73%)
PSI 583..>606 CDD:396154 18/22 (82%)
Ig 632..724 CDD:472250 59/91 (65%)
Ig strand B 642..646 CDD:409353 2/3 (67%)
Ig strand C 658..662 CDD:409353 0/3 (0%)
Ig strand E 686..690 CDD:409353 2/3 (67%)
Ig strand F 700..705 CDD:409353 3/4 (75%)
Ig strand G 717..720 CDD:409353 2/2 (100%)
LOC1277221XP_061506710.1 None

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