DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and AT4G19770

DIOPT Version :10

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_193712.2 Gene:AT4G19770 / 827721 AraportID:AT4G19770 Length:261 Species:Arabidopsis thaliana


Alignment Length:261 Identity:60/261 - (22%)
Similarity:107/261 - (40%) Gaps:35/261 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 MVASPKKRDNFYSSMLEFMFRWGFDGVQIDWRYPTLLGGHPDDRQNFVILLEE-----LGLIFRK 174
            |.:|...|.:|..|.:.....:||||:.:||.||.    :..:..:|..||:|     .|..:..
plant     1 MASSSYGRKSFILSTISIARSYGFDGLDLDWEYPR----NAAEMSDFAELLKEWRYAVQGEAYSS 61

  Fly   175 N-QLILMVAVLGRRDNRILESYNIPEIVNHSDFIHLMMHDEQDPYHLRLAYNAPLVGY---EGSV 235
            . .::::.|.:....|.....|.:..|....|::::..:|...|....:. ..|...|   :|..
plant    62 ELPVLILTATVYYSSNYNGVVYPVKFISELLDWVNIKAYDFYGPGCTEVT-GPPAALYLQSDGPS 125

  Fly   236 TDS-IMHWKRNGGAPEKLILGIPLFVRSFTM--DRNQ----STVGSACKGPGRQTKQSHRPGFMT 293
            .|| :..|...|...||.:||.|.:..::|:  .:|.    .|.|.|....|.          ::
plant   126 GDSGVKDWIDAGLPAEKAVLGFPYYGWAWTLADPKNHGYYVDTTGPAISDDGE----------IS 180

  Fly   294 YNE---WCVQQSKWSRMFDQLAKVPYATRGDQWVSYENPRSIWAKMHLLQEHKLGGAMAWTIDVD 355
            |::   |.| .:|.:.:.|.:....|...|..|:.|::..||..|:...::..|.|..:|.:..|
plant   181 YSQLKTWIV-DNKATTVHDNIVIGDYCYAGTTWIGYDSEESIVTKVIYAKQKGLLGYFSWQVGGD 244

  Fly   356 D 356
            |
plant   245 D 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:471972 60/261 (23%)
ChtBD2 394..438 CDD:214696
AT4G19770NP_193712.2 GH18_chitinase-like <1..250 CDD:471972 60/261 (23%)
Blue background indicates that the domain is not in the aligned region.

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