DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and AT4G19750

DIOPT Version :10

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_193710.2 Gene:AT4G19750 / 827719 AraportID:AT4G19750 Length:362 Species:Arabidopsis thaliana


Alignment Length:366 Identity:80/366 - (21%)
Similarity:143/366 - (39%) Gaps:72/366 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 SYY-YKGRSQFFEWHLDSRLCTHLVLGSGIGVDGDSGELRIT-------DKILLLEKDKLSSVKT 89
            ||: .|..:.|...::||...|||..... .||..:.|:.|:       .......|||.:.|:|
plant    17 SYWVVKPENDFPAGNIDSTRFTHLFCAFA-DVDSSTHEVTISAANSCQVSSFTHTVKDKNTDVQT 80

  Fly    90 MKWDSIKKVMFTIGGWEEDSSSFSRMVASPKKRDNFYSSMLEFMFRWGFDGVQIDWRYPTLLGGH 154
                     :.:|||.:.|.:..:.|.::.|.|..|..|.::...:..|.|:.:.|.||:    :
plant    81 ---------LLSIGGKDADKAVLASMASNSKNRKAFIDSSIDIARKKDFYGLDLAWEYPS----N 132

  Fly   155 PDDRQNFVILLEELGLIF-----RKNQL-ILMVAVLGRRDNRILESYNIPEIVNHSDFIHLMMHD 213
            ..:..||..|::|.....     |.||| :|:.|.:....:...|.|.:..|.::.||:::|.:|
plant   133 DVEMANFGKLVKEWRAAVVEESDRTNQLPLLLTAAVYYSPDYYGEEYPVQAIADNLDFVNIMAYD 197

  Fly   214 EQDPYHLRLAYNAPLVGYEGSVTD-----------SIMHWKRNGGAPEKLILGIPLFVRSFTMD- 266
            ...|..      :|:.|...::.|           .:..|.......:|.:||......::|:: 
plant   198 FYGPGW------SPVTGPPAALFDPSNPAGRSGDSGLSKWLEAKLPAKKAVLGFSYCGWAWTLED 256

  Fly   267 -----RNQSTVGSACKGPGRQTKQSHR-----PGFMTYNEWCVQQSKWSRMFDQLAKVPYATRGD 321
                 .:.:|.|:|....|..|....|     .|..|:::..|...             |...|.
plant   257 AENNGYDAATDGAAISSDGSITYAKIRNYIIDNGAATFHDPAVIGF-------------YCYVGT 308

  Fly   322 QWVSYENPRSIWAKMHLLQEHKLGGAMAWTIDVDDFRGRCG 362
            .|:.|::.:||.:|:...:...|.|..:|.:..|   ..||
plant   309 TWIGYDDNQSIVSKVRYAKLKGLLGYFSWHVGAD---YNCG 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:471972 80/366 (22%)
ChtBD2 394..438 CDD:214696
AT4G19750NP_193710.2 GH18_plant_chitinase_class_V 11..348 CDD:119358 80/366 (22%)
Blue background indicates that the domain is not in the aligned region.

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