DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and AT4G19740

DIOPT Version :10

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_193709.3 Gene:AT4G19740 / 827718 AraportID:AT4G19740 Length:211 Species:Arabidopsis thaliana


Alignment Length:216 Identity:52/216 - (24%)
Similarity:85/216 - (39%) Gaps:47/216 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 MVASPKKRDNFYSSMLEFMFRWGFDGVQIDWRYPTLLGGHPDDRQNFVILLEE-----------L 168
            |.::...|::|.||.:......||.|:.:.|.||    .:..:..||..||:|           .
plant     1 MASNRTSRESFISSSISIARSLGFYGLDLAWEYP----NNDVEMNNFGKLLQEWRSAVEVESQRT 61

  Fly   169 GLIFRKNQLILMVAVLGRRD-NRILESYNIPEIVNHSDFIHLMMHDEQDPYHLRLAYNAPLVGYE 232
            |:    ..|:|..||....| |.:  ||.:..|....|:::|:.::.   |.|......|...|:
plant    62 GI----RPLLLTAAVYYTSDYNSV--SYPVQAINRSLDWVNLIAYEF---YGLTTEIGPPAGLYD 117

  Fly   233 GSV-----TDSIMHWKRNGGAPEKLILGIPLFVRSFTMDRNQSTVGSACKGPGRQTKQSHRPGFM 292
            .|:     ...:.||.:.|...:|.:.|.|....|:|:|.:        |..|.....:||.. :
plant   118 PSIKGPCGDTGLKHWLKAGLPEKKAVFGFPYVGWSWTLDDD--------KDHGDDVAVTHRVA-V 173

  Fly   293 TYNEWCVQQSKWSRMFDQLAK 313
            |.|        .|..:||:.|
plant   174 TAN--------GSINYDQIVK 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:471972 52/216 (24%)
ChtBD2 394..438 CDD:214696
AT4G19740NP_193709.3 GH18_chitinase-like <23..211 CDD:471972 47/194 (24%)
Blue background indicates that the domain is not in the aligned region.

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