DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and AT4G19730

DIOPT Version :9

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_193708.1 Gene:AT4G19730 / 827717 AraportID:AT4G19730 Length:332 Species:Arabidopsis thaliana


Alignment Length:311 Identity:66/311 - (21%)
Similarity:135/311 - (43%) Gaps:34/311 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LDSRLCTHLVLGSGIGVDGDSGELRITDKILLLEKDKLSSVKTMKWDSIKKVMFTIGGWEEDSSS 111
            :.|.|.|||..... .:|.:|.::.::.....:......:||..  :...|.:.:|||...::|:
plant    35 IPSALFTHLFCAFA-DLDANSHKVFVSQAHEFIFSTFTETVKIR--NPQVKTLLSIGGKNANNSA 96

  Fly   112 FSRMVASPKKRDNFYSSMLEFMFRWGFDGVQIDWRYPTLLGGHPD-DRQNFVILLEELGLIFR-- 173
            |:.|.::.:.|..|..|.:......||.|:.:.|.||     :.| :..:|..|:.||.....  
plant    97 FASMASNHQSRKTFIDSWIFIARSNGFHGLDLAWEYP-----YSDHEMTDFGNLVGELRAAVEAE 156

  Fly   174 -----KNQLILMVAVLGRRDNRILESYNIP-EIVNHS-DFIHLMMHDEQDPYHLRLAYNAPLVGY 231
                 |..|:|..||.   .:.:.:::..| :::..| |:::::.:|...|.. ...:..|..|.
plant   157 SRRSSKPTLLLTAAVY---YSSVYKTFTYPVQVMRESLDWVNIIAYDFYGPVS-SSKFTVPTAGL 217

  Fly   232 ------EGSVTDS-IMHWKRNGGAPEKLILGIPLFVRSFTMDRNQST-VGSACKGPGRQTKQSHR 288
                  ||...|| :..|.::|...:|.:||......::|:..::.| ..:|..|..:.......
plant   218 HVSSNNEGPSGDSGLKQWIKDGLPEKKAVLGFSYVGWAWTLQNDKDTGYNAAAAGVAKSEDDVSE 282

  Fly   289 PGFMTY---NEWCVQQSKWSRMFDQLAKVPYATRGDQWVSYENPRSIWAKM 336
            .|.:.|   |:: ::..:.::::|......|......|:.||:.:|:.||:
plant   283 DGSINYAQINKF-IRDEEAAKVYDPKVVGHYCFAKKIWIGYEDTQSVEAKV 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:299167 66/311 (21%)
Glyco_hydro_18 47..355 CDD:279094 66/311 (21%)
ChtBD2 394..438 CDD:214696
AT4G19730NP_193708.1 GH18_chitinase-like 11..332 CDD:415847 65/309 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 160 1.000 Inparanoid score I1632
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X91
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.930

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