DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht12 and XB5763442

DIOPT Version :9

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:XP_031751817.1 Gene:XB5763442 / 548945 XenbaseID:XB-GENE-5763443 Length:486 Species:Xenopus tropicalis


Alignment Length:491 Identity:129/491 - (26%)
Similarity:226/491 - (46%) Gaps:75/491 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VFMIMIFLICGCIAKEYNVFCQYDLGSYYYKGRSQFFEWHLDSRLCTHLVLGSGIGVDGDSGELR 71
            :|:.:..|:...:...:.:.|.:...:.||.|.:|:....:|..:||||:....         ..
 Frog     6 LFLGITLLLHVQLGSSFKLVCYFTNWAQYYPGVAQYMPDDVDPCMCTHLIYAFA---------TM 61

  Fly    72 ITDKILLLEKDK---LSSVKTMK-WDSIKKVMFTIGGWEEDSSSFSRMVASPKKRDNFYSSMLEF 132
            ..::|.:.|.:.   .:|...:| ::|..|.:.::|||...:|.|:.||:||:.|..|.:|::.|
 Frog    62 TNNEIAIFEPNDPAFYASFNALKNYNSELKTLLSVGGWNYGTSGFNNMVSSPQNRQTFINSVITF 126

  Fly   133 MFRWGFDGVQIDWRYP--TLLGGHPDDRQNFVILLEELGLIFRKN-------QLILMVAVLGRRD 188
            :.::||||:.|||.||  :..|..|:.::.:.|||:|:...|.:.       :|::..||.....
 Frog   127 LRKYGFDGLDIDWEYPGDSDRGSPPETKEQYSILLQEMYNAFVQEASQSNLPRLLISAAVSAGMP 191

  Fly   189 NRILESYNIPEIVNHSDFIHLMMHDEQDPYHLRLAYNAPLVGYEG----------SVTDSIMHWK 243
            . |...|.||::..:.|.|::|.:|.:..:......::||  |:|          :|..::.:||
 Frog   192 T-IEAGYQIPQLSQYLDLINVMTYDLRGSWEGFTGEDSPL--YQGPADQGGYIYFNVDYAMNYWK 253

  Fly   244 RNGGAPEKLILGIPLFVRSFTM-DRNQSTVGSACKGPGRQTKQSHRPGFMTYNEWC--VQQSKWS 305
            .||.|||||::|.|.:.|:||: |.:.:.:|:...|.|.....:...|||.|.|.|  ::|.. :
 Frog   254 NNGAAPEKLMVGFPAYGRTFTLSDPSNNGLGAPTSGGGPAAPYTQESGFMAYFEICNFLKQGA-T 317

  Fly   306 RMFDQLAKVPYATRGDQWVSYENPRSIWAKMHLLQEHKLGGAMAWTIDVDDFRGR-CGE-QHGLL 368
            .:::....||||.:|.:|:.|:|.:|...|...|.::..||||.|.:.:|||.|. ||: .:.|:
 Frog   318 VVWNSPQAVPYAYKGSEWIGYDNEKSFQIKAEWLMKNNFGGAMVWALPLDDFSGHFCGQGNYPLM 382

  Fly   369 RVIFSALG--------------DKNGLTTEKPTT------------------EASGLC--PHDGF 399
            ..:.|.||              ......||..||                  .:||.|  ..:|.
 Frog   383 NTLKSTLGISFPNCKAPTVTVAPNTAAPTEAATTASASGSGGSGSGGSASGSSSSGFCVGKSNGL 447

  Fly   400 SRDGWDCRLYHECRDGERIYYECLEGQYFDENQIVC 435
            ..|..:...:..|.:|......|.....||.:...|
 Frog   448 YPDPTNKSGFFNCLNGITYQQACQTSLVFDASCSCC 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:299167 110/377 (29%)
Glyco_hydro_18 47..355 CDD:279094 97/333 (29%)
ChtBD2 394..438 CDD:214696 9/44 (20%)
XB5763442XP_031751817.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.