DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht12 and chia

DIOPT Version :9

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_001186489.1 Gene:chia / 548404 XenbaseID:XB-GENE-5868468 Length:482 Species:Xenopus tropicalis


Alignment Length:510 Identity:135/510 - (26%)
Similarity:210/510 - (41%) Gaps:114/510 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MIMIFLICGC-------IAKEYNVFCQYDLGSYYYKGRSQFFEWHLDSRLCTHLVLGSGIGVDGD 66
            |..:.|:.|.       :...|.:.|.:...:.|..|..:|...::|..|||||:....    |.
 Frog     1 MAKLILLVGLALVLNAQLGSAYELTCYFTNWAQYRPGLGKFKPDNIDPCLCTHLIYAFA----GM 61

  Fly    67 SGELRITDKILLLEKDKLSSVKTMKWDSIK---------------KVMFTIGGWEEDSSSFSRMV 116
            |.                :.:.|::|:.:.               |.:..||||...::.|:.||
 Frog    62 SN----------------NQITTIEWNDVTLYSSFQNLKNQNGNLKTLLAIGGWNFGTAPFTAMV 110

  Fly   117 ASPKKRDNFYSSMLEFMFRWGFDGVQIDWRYPTLLGGHPDDRQNFVILLEELGLIF-------RK 174
            |:.:.|..|.||:::|:.::||||:..||.||...|..|.|:|.|..|::|:...|       .|
 Frog   111 ATAQSRQTFISSVIKFLRQYGFDGLDFDWEYPGSRGSPPQDKQLFTTLVQEMLAAFEAEASQSNK 175

  Fly   175 NQLILMVAVLGRRDNRILESYNIPEIVNHSDFIHLMMHDEQDPYHLRLAYNAPL------VGYEG 233
            .:|::..||.....| |...|.||::....|:||:|.:|....:......|:||      .||..
 Frog   176 PRLMVTAAVAAGISN-IESGYQIPQLSQALDYIHVMTYDLHGSWEGYTGENSPLYTNPSATGYNA 239

  Fly   234 SV-TDSIM-HWKRNGGAPEKLILGIPLFVRSFTMDR-NQSTVGSACKGPGRQTKQSHRPGFMTYN 295
            .: .|.:| :|..||....|||:|.|.:..:|.:.. :.:.:|:...|.|.....:.:.||..|.
 Frog   240 YLNVDYVMNYWLNNGAPASKLIVGFPTYGHTFILSNPSNNGIGAPTSGNGPAGPYTRQAGFWAYY 304

  Fly   296 EWCV-----QQSKWSRMFDQLAKVPYATRGDQWVSYENPRSIWAKMHLLQEHKLGGAMAWTIDVD 355
            |.|.     ..:.||...|    ||||.:|.:|:.|:|.:|...|...|.::.|||||.|.||:|
 Frog   305 EICTFLKNGATNLWSSAED----VPYAYQGSEWLGYDNEKSFQIKAEWLMKNNLGGAMVWAIDLD 365

  Fly   356 DFRGR-CGE-QHGLLRVIFSALG-DKNGLT---------TEKPTT-------------------- 388
            ||.|. |.: :..|:..:.:.|| ..:|.|         |..|.|                    
 Frog   366 DFTGTFCNQGKFPLINTLKNTLGVQASGCTPPATPVAPVTAAPATVPSGSGSGSSGSGSSSGGSS 430

  Fly   389 --------EASGLCPHDGFSRDGWDCRLYHECRDGERIYYECLEGQYFDENQIVC 435
                    :||||.|..|.:...|      .|.:|......|..|..||.:...|
 Frog   431 GGSGFCAGKASGLYPVAGNTNAFW------HCLNGITYQQHCQTGLVFDPSCECC 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:299167 110/387 (28%)
Glyco_hydro_18 47..355 CDD:279094 100/343 (29%)
ChtBD2 394..438 CDD:214696 10/42 (24%)
chiaNP_001186489.1 GH18_chitolectin_chitotriosidase 24..387 CDD:119351 110/387 (28%)
Glyco_18 26..365 CDD:214753 104/363 (29%)
CBM_14 436..482 CDD:279884 14/50 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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