DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and chit1

DIOPT Version :10

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_001005792.1 Gene:chit1 / 448265 XenbaseID:XB-GENE-5801457 Length:492 Species:Xenopus tropicalis


Alignment Length:479 Identity:127/479 - (26%)
Similarity:203/479 - (42%) Gaps:91/479 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 YNVFCQYDLGSYYYKGRSQFFEWHLDSRLCTHLVLGSGIGVDGDSGELRITDKILLLEKDKLSSV 87
            |.:.|.:...|.|....:::...::|.:|||||:.................|.:|.         
 Frog    22 YKLVCYFTNWSQYRPEPAKYMPGNIDPKLCTHLIYAFATMNSNKIAPYEWNDDVLY--------- 77

  Fly    88 KTMKWDSIKK------VMFTIGGWEEDSSSFSRMVASPKKRDNFYSSMLEFMFRWGFDGVQIDWR 146
              .:::::|:      .:..||||...:..|:.||:|...|..|..|::|::..:||:|:.:|:.
 Frog    78 --KQYNALKQQNPNLVTLLAIGGWNFGTQKFTEMVSSAGNRKIFIDSVIEYLRLYGFNGIDLDFE 140

  Fly   147 YPTLLGGHPDDRQNFVILLEELGLIFR-----KNQ-LILMVAVLGRRDNRILESYNIPEIVNHSD 205
            ||...|..|:|:..|.||.:|:...|.     .|| .:||.|.:......|...|.|.||....|
 Frog   141 YPGSRGSPPEDKHRFTILTQEMLKAFEDEAAATNQSRLLMTAAVSAGKGTIDAGYEIAEIGKTLD 205

  Fly   206 FIHLMMHDEQDPYHLRLAYNAPLVGYEGS----------VTDSIMHWKRNGGAPEKLILGIPLFV 260
            ||.:|.:|....:.....:|:||.  :||          :..::.:||.||...:||::|.|.:.
 Frog   206 FISVMTYDFHGGWDPVSGHNSPLC--KGSKDTGDFQYFNIRYAMNYWKDNGVPAQKLLIGFPTYG 268

  Fly   261 RSFTMDRNQS----TVGSACKGPGRQTKQSHRPGFMTYNEWCVQQS----KWSRMFDQLAKVPYA 317
            |:|   ||.:    .||....|.|...:.:...||..|.|.|...|    .|  :.||  |||||
 Frog   269 RTF---RNPNPSNCDVGIPVSGAGSAGQYTREAGFWAYYEICTWLSGTTINW--IADQ--KVPYA 326

  Fly   318 TRGDQWVSYENPRSIWAKMHLLQEHKLGGAMAWTIDVDDFRGR-CGE-QHGLLRVIFSAL----- 375
            .:|::||.::|..|...|:..|:|....|||.|.||:|||.|. |.: ::.|:..:.|.|     
 Frog   327 CKGNEWVGFDNQDSYECKVKFLKESGFAGAMVWAIDLDDFSGTFCNQGKYPLISHLKSLLEGSVT 391

  Fly   376 --------------------GDKN--------GLTTEKPTTEASGLCPH------DGFSRDGWDC 406
                                |:..        |.||...||....:.|:      ||...:..:.
 Frog   392 KCPGNPCDIVPTEPPSPTTSGETTTSQAKPTPGETTTSTTTSGDEVDPNFCAGKSDGLYENRINF 456

  Fly   407 RLYHECRDGERIYYECLEGQYFDE 430
            ..::.|..|.....:|.:|..|||
 Frog   457 NRFYICAGGSTYPMKCADGLVFDE 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:471972 109/381 (29%)
ChtBD2 394..438 CDD:214696 10/43 (23%)
chit1NP_001005792.1 GH18_chitolectin_chitotriosidase 24..386 CDD:119351 109/381 (29%)
CBM_14 442..491 CDD:426342 9/39 (23%)

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