DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and chit1

DIOPT Version :9

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_001005792.1 Gene:chit1 / 448265 XenbaseID:XB-GENE-5801457 Length:492 Species:Xenopus tropicalis


Alignment Length:479 Identity:127/479 - (26%)
Similarity:203/479 - (42%) Gaps:91/479 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 YNVFCQYDLGSYYYKGRSQFFEWHLDSRLCTHLVLGSGIGVDGDSGELRITDKILLLEKDKLSSV 87
            |.:.|.:...|.|....:::...::|.:|||||:.................|.:|.         
 Frog    22 YKLVCYFTNWSQYRPEPAKYMPGNIDPKLCTHLIYAFATMNSNKIAPYEWNDDVLY--------- 77

  Fly    88 KTMKWDSIKK------VMFTIGGWEEDSSSFSRMVASPKKRDNFYSSMLEFMFRWGFDGVQIDWR 146
              .:::::|:      .:..||||...:..|:.||:|...|..|..|::|::..:||:|:.:|:.
 Frog    78 --KQYNALKQQNPNLVTLLAIGGWNFGTQKFTEMVSSAGNRKIFIDSVIEYLRLYGFNGIDLDFE 140

  Fly   147 YPTLLGGHPDDRQNFVILLEELGLIFR-----KNQ-LILMVAVLGRRDNRILESYNIPEIVNHSD 205
            ||...|..|:|:..|.||.:|:...|.     .|| .:||.|.:......|...|.|.||....|
 Frog   141 YPGSRGSPPEDKHRFTILTQEMLKAFEDEAAATNQSRLLMTAAVSAGKGTIDAGYEIAEIGKTLD 205

  Fly   206 FIHLMMHDEQDPYHLRLAYNAPLVGYEGS----------VTDSIMHWKRNGGAPEKLILGIPLFV 260
            ||.:|.:|....:.....:|:||.  :||          :..::.:||.||...:||::|.|.:.
 Frog   206 FISVMTYDFHGGWDPVSGHNSPLC--KGSKDTGDFQYFNIRYAMNYWKDNGVPAQKLLIGFPTYG 268

  Fly   261 RSFTMDRNQS----TVGSACKGPGRQTKQSHRPGFMTYNEWCVQQS----KWSRMFDQLAKVPYA 317
            |:|   ||.:    .||....|.|...:.:...||..|.|.|...|    .|  :.||  |||||
 Frog   269 RTF---RNPNPSNCDVGIPVSGAGSAGQYTREAGFWAYYEICTWLSGTTINW--IADQ--KVPYA 326

  Fly   318 TRGDQWVSYENPRSIWAKMHLLQEHKLGGAMAWTIDVDDFRGR-CGE-QHGLLRVIFSAL----- 375
            .:|::||.::|..|...|:..|:|....|||.|.||:|||.|. |.: ::.|:..:.|.|     
 Frog   327 CKGNEWVGFDNQDSYECKVKFLKESGFAGAMVWAIDLDDFSGTFCNQGKYPLISHLKSLLEGSVT 391

  Fly   376 --------------------GDKN--------GLTTEKPTTEASGLCPH------DGFSRDGWDC 406
                                |:..        |.||...||....:.|:      ||...:..:.
 Frog   392 KCPGNPCDIVPTEPPSPTTSGETTTSQAKPTPGETTTSTTTSGDEVDPNFCAGKSDGLYENRINF 456

  Fly   407 RLYHECRDGERIYYECLEGQYFDE 430
            ..::.|..|.....:|.:|..|||
 Frog   457 NRFYICAGGSTYPMKCADGLVFDE 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:299167 109/381 (29%)
Glyco_hydro_18 47..355 CDD:279094 99/337 (29%)
ChtBD2 394..438 CDD:214696 10/43 (23%)
chit1NP_001005792.1 GH18_chitolectin_chitotriosidase 24..386 CDD:119351 109/381 (29%)
CBM_14 442..491 CDD:366726 9/39 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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