DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and chia.3

DIOPT Version :10

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_998378.1 Gene:chia.3 / 406819 ZFINID:ZDB-GENE-040426-2891 Length:471 Species:Danio rerio


Alignment Length:477 Identity:136/477 - (28%)
Similarity:216/477 - (45%) Gaps:71/477 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LICG-----C-IAKEYNVFCQYDLGSYYYKGRSQFFEWHLDSRLCTHLVLGSGIGVDGDSGELRI 72
            ||.|     | :|....:.|.:...|.|..|..::...::|..|||||:.  ...:.....|| :
Zfish     6 LIAGLSLVLCHVAFSMEMACYFTNWSQYRPGIGKYTPANVDPYLCTHLIY--AFSIINQRNEL-V 67

  Fly    73 T----DKILLLE----KDKLSSVKTMKWDSIKKVMFTIGGWEEDSSSFSRMVASPKKRDNFYSSM 129
            |    |:.|...    |:|..::||         :..:|||...|:.||.||::|..|..|..|.
Zfish    68 TYEWNDETLYKAFNELKNKNPTLKT---------LLAVGGWNFGSAQFSIMVSNPANRKTFIQST 123

  Fly   130 LEFMFRWGFDGVQIDWRYPTLLGGHPDDRQNFVILLEELGLIFRK------NQLILMVAVLGRRD 188
            ::|:...||||:.:||.||...|..|:|:|.|.:|.:||...:..      |..:::.|.:....
Zfish   124 IKFLRTHGFDGLDLDWEYPGARGSPPEDKQRFTLLCKELVAAYEAESKATGNPQLMLTAAVSAGK 188

  Fly   189 NRILESYNIPEIVNHSDFIHLMMHDEQDPYHLRLAYNAPLVGYEGSV---------TDSIM-HWK 243
            ..|.:.|.|.||..:.:||::|.:|....:.....:|:||  |:||.         ||..| :|:
Zfish   189 GTIDDGYEIAEIAKYLNFINVMTYDFHGTWERFTGHNSPL--YQGSKDEGDLIYFNTDYAMRYWR 251

  Fly   244 RNGGAPEKLILGIPLFVRSFTMDRNQSTVGSACKGPGRQTKQSHRPGFMTYNEWC--VQQSKWSR 306
            .||...|||.:|...:.|:|.:..:.::||:...||......:...||.:|.|.|  ::.:....
Zfish   252 DNGTPVEKLRMGFAAYGRTFRLTSSDTSVGAPASGPASAGTYTREAGFWSYYEICGFLEGTTIQW 316

  Fly   307 MFDQLAKVPYATRGDQWVSYENPRSIWAKMHLLQEHKLGGAMAWTIDVDDFRGR-CGE-QHGLLR 369
            :.||  ||||||:..:||.::...|...|:..|::...|||..|.:|:|||.|: |.: .|.|:.
Zfish   317 IDDQ--KVPYATKNSEWVGFDTKESYETKVRYLKDKNFGGAFVWALDLDDFAGQFCSQGNHPLMA 379

  Fly   370 VIFSALG-----------DKNGLTTEKPTTEAS--------GLC--PHDGFSRDGWDCRLYHECR 413
            .:.:.|.           .|.|.:|.:|||..:        |.|  ..||......|...|:.|.
Zfish   380 HLRNLLDIELPPMPSTTTPKPGQSTTRPTTTTTTTTHAPGPGFCNGKPDGLYAHPNDPNKYYSCA 444

  Fly   414 DGERIYYECLEGQYFDENQIVC 435
            .|.....:|..|..||::...|
Zfish   445 GGHTFVEKCAVGTVFDDSCKCC 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:471972 111/377 (29%)
ChtBD2 394..438 CDD:214696 12/44 (27%)
chia.3NP_998378.1 GH18_chitolectin_chitotriosidase 25..385 CDD:119351 111/375 (30%)
ChtBD2 421..469 CDD:214696 13/46 (28%)

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