DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and chia.2

DIOPT Version :9

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_998414.1 Gene:chia.2 / 406338 ZFINID:ZDB-GENE-040426-2014 Length:470 Species:Danio rerio


Alignment Length:459 Identity:140/459 - (30%)
Similarity:213/459 - (46%) Gaps:68/459 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 CQYDLGSYYYKGRSQFFEWHLDSRLCTHLVLGSGIGVDGDSGELRIT----DKILLLEKDKLSSV 87
            |.:...|.|..|..::...::|..|||||..  ...:...:.|| ||    |:.|....::|.:.
Zfish    25 CYFTNWSQYRPGIGKYTPANVDPFLCTHLFY--AFAMINHANEL-ITYEWNDETLYKAFNELKNT 86

  Fly    88 KTMKWDSIKKVMFTIGGWEEDSSSFSRMVASPKKRDNFYSSMLEFMFRWGFDGVQIDWRYPTLLG 152
                 :...:.:..:|||...|:.||.||:|...|..|..|.::|:..:||||:.:||.||...|
Zfish    87 -----NPHLRTLLAVGGWNFGSTQFSIMVSSAANRQTFIQSSIKFLRTYGFDGMDLDWEYPGSRG 146

  Fly   153 GHPDDRQNFVILLEEL-------GLIFRKNQLILMVAVLGRRDNRILESYNIPEIVNHSDFIHLM 210
            ..|:|:|.|.:|.:||       |....:.:|:|..||...: ..|.:.|.|.||..:.|||::|
Zfish   147 SPPEDKQRFTLLCKELLEAYEAEGKATGRRRLMLSAAVSAGK-GTIDDGYEIAEIAKYLDFINIM 210

  Fly   211 MHDEQDPYHLRLAYNAPLVGYEGSV---------TDSIM-HWKRNGGAPEKLILGIPLFVRSFTM 265
            .:|....:.....:|:||  |:||.         ||..| :|:.||...|||.:|...:.|:|.:
Zfish   211 TYDFHGTWERFTGHNSPL--YQGSKDEGDLVYFNTDYAMRYWRDNGTPVEKLRMGFATYGRTFRL 273

  Fly   266 DRNQSTVGSACKGPGRQTKQSHRPGFMTYNEWC-------VQQSKWSRMFDQLAKVPYATRGDQW 323
            ..:.::||:...||......:...||.:|.|.|       ||   |  :.||  ||||||:..:|
Zfish   274 TSSDTSVGAPASGPASAGTYTREAGFWSYYEICGFLEGTTVQ---W--IDDQ--KVPYATKNSEW 331

  Fly   324 VSYENPRSIWAKMHLLQEHKLGGAMAWTIDVDDFRGR-CGE-QHGLLRVIFSALG---------- 376
            |.::...|...|:..|::.|.|||..|.:|:|||.|: ||: .|.|:..:.:.|.          
Zfish   332 VGFDTKESYETKVRYLKDKKFGGAFVWALDLDDFAGQFCGQGNHPLMGHLRNLLDIELPPLPPPT 396

  Fly   377 -DKNGLTTEKPTTEASGL--CPHDGFSR---DGW----DCRLYHECRDGERIYYECLEGQYFDEN 431
             .|.|.:|.:|||..:..  .|..||..   ||.    |...|:.|..|:.....|..|..|||:
Zfish   397 TAKPGQSTTRPTTTTTTTTHAPGPGFCNGKPDGLYAHPDPNKYYSCAGGQTYVDNCGAGTEFDES 461

  Fly   432 QIVC 435
            ...|
Zfish   462 CKCC 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:299167 118/377 (31%)
Glyco_hydro_18 47..355 CDD:279094 106/335 (32%)
ChtBD2 394..438 CDD:214696 15/49 (31%)
chia.2NP_998414.1 GH18_chitolectin_chitotriosidase 23..385 CDD:119351 118/377 (31%)
Glyco_18 24..363 CDD:214753 110/355 (31%)
CBM_14 423..468 CDD:279884 12/43 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

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