DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht12 and chia.1

DIOPT Version :10

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_998215.1 Gene:chia.1 / 406323 ZFINID:ZDB-GENE-040426-1994 Length:455 Species:Danio rerio


Alignment Length:452 Identity:131/452 - (28%)
Similarity:204/452 - (45%) Gaps:66/452 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 IAKEYNVFCQYDLGSYYYKGRSQFFEWHLDSRLCTHLVLG-SGIGVDGDSGELRITDKILLLEKD 82
            |.....:.|.....|.|..|..:|...::|..||||:|.. :.|..|         ::|..:|.:
Zfish    18 IVSSTKLVCYMTNWSQYRPGNGKFLPENIDPFLCTHVVYALATISYD---------NQITTIEWN 73

  Fly    83 KLSSVKTMKWDSIKKV------MFTIGGWEEDSSSFSRMVASPKKRDNFYSSMLEFMFRWGFDGV 141
            .:...|:|  :.:|||      ..::||.....|.:..|||:|:.|..|..:.|.|:....|||:
Zfish    74 DVDLYKSM--NELKKVNPALKTQLSVGGLVNGVSPYINMVATPENRKAFIRNALLFLRLHEFDGM 136

  Fly   142 QIDWRYPTLLGGHPDDRQNFVILLEEL-------GLIFRKNQLILMVAVLGRRDNRILESYNIPE 199
            .|||:||...|..|.|:|.....::|:       .:..:|..|:|.:.|...: ..|..:|...|
Zfish   137 DIDWQYPGHNGSPPQDKQRLTTFIKEMRDAIEQEAIDTKKTPLLLSIKVSAIK-TTIENAYEAKE 200

  Fly   200 IVNHSDFIHLMMHDEQDPYHLRLAYNAPLVGYEGSV-TDSIMH---------WKRNGGAPEKLIL 254
            :.:..||:.:|.:|....:.....:|:||  :..|. |.||:|         |..:|...::|:|
Zfish   201 VASLVDFVTIMSYDYHGHWDPITGHNSPL--FRSSFDTGSIVHHNINSSLEFWLGSGAPADRLLL 263

  Fly   255 GIPLFVRSFTMDRNQSTVGSACKGPGRQTKQSHRPGFMTYNEWCVQQSK----WSRMFDQLAKVP 315
            |:|.:.|:|.:..:|:.:|:...||......:...||.:|.|.|..:|.    |  :.:|:  ||
Zfish   264 GLPTYGRTFMLSTSQTGLGAPANGPADAGPYTREAGFWSYYEICPMESSVPIHW--IDEQM--VP 324

  Fly   316 YATRGDQWVSYENPRSIWAKMHLLQEHKLGGAMAWTIDVDDFRGR-C-GEQHGLLRVIFSALG-D 377
            ||.:|..||.::|..||.||:..|...|||||..||:|.|||.|| | ...:.|:..:.::|| .
Zfish   325 YAVQGRAWVGFDNQESITAKVQWLNSLKLGGASVWTLDFDDFAGRFCYNGAYPLVNHLRNSLGFP 389

  Fly   378 KNGLTTEKPTTEA-----------SGLCPHDGFSRDGWDCRLYHECRDGERIYYECLEGQYF 428
            ....||.:|||.|           .||.||.      .|...|..|..|.....:|..|..|
Zfish   390 PKPTTTPRPTTTADPINSFCVGKPDGLYPHP------TDASKYFHCFRGNTYLQQCQPGLVF 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:471972 111/379 (29%)
ChtBD2 394..438 CDD:214696 9/35 (26%)
chia.1NP_998215.1 GH18_chitolectin_chitotriosidase 24..386 CDD:119351 111/379 (29%)
ChtBD2 407..455 CDD:214696 11/45 (24%)

Return to query results.
Submit another query.