DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and chia.1

DIOPT Version :9

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_998215.1 Gene:chia.1 / 406323 ZFINID:ZDB-GENE-040426-1994 Length:455 Species:Danio rerio


Alignment Length:452 Identity:131/452 - (28%)
Similarity:204/452 - (45%) Gaps:66/452 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 IAKEYNVFCQYDLGSYYYKGRSQFFEWHLDSRLCTHLVLG-SGIGVDGDSGELRITDKILLLEKD 82
            |.....:.|.....|.|..|..:|...::|..||||:|.. :.|..|         ::|..:|.:
Zfish    18 IVSSTKLVCYMTNWSQYRPGNGKFLPENIDPFLCTHVVYALATISYD---------NQITTIEWN 73

  Fly    83 KLSSVKTMKWDSIKKV------MFTIGGWEEDSSSFSRMVASPKKRDNFYSSMLEFMFRWGFDGV 141
            .:...|:|  :.:|||      ..::||.....|.:..|||:|:.|..|..:.|.|:....|||:
Zfish    74 DVDLYKSM--NELKKVNPALKTQLSVGGLVNGVSPYINMVATPENRKAFIRNALLFLRLHEFDGM 136

  Fly   142 QIDWRYPTLLGGHPDDRQNFVILLEEL-------GLIFRKNQLILMVAVLGRRDNRILESYNIPE 199
            .|||:||...|..|.|:|.....::|:       .:..:|..|:|.:.|...: ..|..:|...|
Zfish   137 DIDWQYPGHNGSPPQDKQRLTTFIKEMRDAIEQEAIDTKKTPLLLSIKVSAIK-TTIENAYEAKE 200

  Fly   200 IVNHSDFIHLMMHDEQDPYHLRLAYNAPLVGYEGSV-TDSIMH---------WKRNGGAPEKLIL 254
            :.:..||:.:|.:|....:.....:|:||  :..|. |.||:|         |..:|...::|:|
Zfish   201 VASLVDFVTIMSYDYHGHWDPITGHNSPL--FRSSFDTGSIVHHNINSSLEFWLGSGAPADRLLL 263

  Fly   255 GIPLFVRSFTMDRNQSTVGSACKGPGRQTKQSHRPGFMTYNEWCVQQSK----WSRMFDQLAKVP 315
            |:|.:.|:|.:..:|:.:|:...||......:...||.:|.|.|..:|.    |  :.:|:  ||
Zfish   264 GLPTYGRTFMLSTSQTGLGAPANGPADAGPYTREAGFWSYYEICPMESSVPIHW--IDEQM--VP 324

  Fly   316 YATRGDQWVSYENPRSIWAKMHLLQEHKLGGAMAWTIDVDDFRGR-C-GEQHGLLRVIFSALG-D 377
            ||.:|..||.::|..||.||:..|...|||||..||:|.|||.|| | ...:.|:..:.::|| .
Zfish   325 YAVQGRAWVGFDNQESITAKVQWLNSLKLGGASVWTLDFDDFAGRFCYNGAYPLVNHLRNSLGFP 389

  Fly   378 KNGLTTEKPTTEA-----------SGLCPHDGFSRDGWDCRLYHECRDGERIYYECLEGQYF 428
            ....||.:|||.|           .||.||.      .|...|..|..|.....:|..|..|
Zfish   390 PKPTTTPRPTTTADPINSFCVGKPDGLYPHP------TDASKYFHCFRGNTYLQQCQPGLVF 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:299167 111/379 (29%)
Glyco_hydro_18 47..355 CDD:279094 99/335 (30%)
ChtBD2 394..438 CDD:214696 9/35 (26%)
chia.1NP_998215.1 Glyco_18 23..364 CDD:214753 104/358 (29%)
GH18_chitolectin_chitotriosidase 24..386 CDD:119351 111/379 (29%)
ChtBD2 407..455 CDD:214696 11/45 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592091
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.850

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