DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht12 and Cht9

DIOPT Version :10

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_611543.3 Gene:Cht9 / 37392 FlyBaseID:FBgn0034582 Length:368 Species:Drosophila melanogaster


Alignment Length:365 Identity:126/365 - (34%)
Similarity:193/365 - (52%) Gaps:11/365 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MIMIFLICGCIAKEYNVFCQYDLGSYYYKGRSQFFEWHLDSRLCTHLVLGSGIGVDGDSGELRIT 73
            ::.:..:...|..|..|.|.:...:.|..|..:|...::|:.|||||.. |..|:: |:||::..
  Fly     7 LLAVLCLSQVIGAERIVNCYWGTWANYRSGNGKFDVSNIDAGLCTHLSY-SFFGIN-DNGEIQSL 69

  Fly    74 DKILLLEKDKLSSVKTMK-WDSIKKVMFTIGGWEEDSSSFSRMVASPKKRDNFYSSMLEFMFRWG 137
            |..|..:...::...::| .:|..||:..:|||.|.|:.:|.|.....||.||.:|.|..:...|
  Fly    70 DTWLDYDLGFINQAISLKNQNSNLKVLAVVGGWNEGSTKYSSMSGDWYKRQNFINSALNLLRNHG 134

  Fly   138 FDGVQIDWRYPTLLGGHPDDRQNFVILLEELGLIFRKNQLILMVAVLGRRDNRILESYNIPEIVN 202
            |||:.:||.||...||:.:||.|||.||.|:...|......|.:|| |..::....||.|..|..
  Fly   135 FDGLDLDWEYPNQRGGNWNDRANFVTLLREIKEAFAPYGYELGIAV-GAGESLASASYEIANIAQ 198

  Fly   203 HSDFIHLMMHDEQDPYHLRLAYNAPLVGYEGSVTDSIMHWKRNGGAPEKLILGIPLFVRSFTM-D 266
            ..|||::|.:|.......:..:|||    :.:|.::|..|...|....||:||:..:.|||.: |
  Fly   199 QVDFINVMTYDFAMASDGQTGFNAP----QWAVENAINFWLSQGAPANKLVLGVGTYGRSFQLSD 259

  Fly   267 RNQSTVGSACKGPGRQTKQSHRPGFMTYNEWCVQQSKWSRMFDQLAKVPYATRGDQWVSYENPRS 331
            .:|:..|:.|:|.|.....:...|::.|||.|  |:.|..:||.....|||..||||||::|..|
  Fly   260 SSQNWPGAPCRGEGSAGSYTGSTGYLGYNEIC--QNNWHTVFDYDNAAPYAYSGDQWVSFDNVLS 322

  Fly   332 IWAKMHLLQEHKLGGAMAWTIDVDDFRGRCGEQHGLLRVI 371
            :..||.......|.|||.|:::.||:||:|||.:.||:.|
  Fly   323 VQYKMDFALSKGLAGAMIWSLETDDYRGQCGETYPLLKTI 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:471972 124/349 (36%)
ChtBD2 394..438 CDD:214696
Cht9NP_611543.3 GH18_chitolectin_chitotriosidase 23..366 CDD:119351 124/349 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.