DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and Idgf3

DIOPT Version :9

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_001285982.1 Gene:Idgf3 / 34981 FlyBaseID:FBgn0020414 Length:441 Species:Drosophila melanogaster


Alignment Length:424 Identity:104/424 - (24%)
Similarity:180/424 - (42%) Gaps:89/424 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 NVFCQYDLGSYYYKGRSQF--FEWHLDSRLCTHLVLGSGIGVDGDSGELRITDKILLLEKDKLSS 86
            |:.|.||......:|.:||  .:..|..:.|||||.|.. ||:.|:.|::..:|.|.||:..|:.
  Fly    26 NLVCFYDSQGSQRQGLAQFSMIDIELALQFCTHLVYGYA-GVNADNYEMQSINKRLDLEQRHLAQ 89

  Fly    87 VKTMK--WDSIKKVMFTIGGWEE--DSSSFSRMVASPKK-RDNFYSSMLEFMFRWGFDGVQIDWR 146
            :.:||  :..| |.:.::||..:  :.:.:.:::.|.:: ...|..|..:.:.|:.|||:.:..:
  Fly    90 ITSMKERYPHI-KFLLSVGGDADTYEGNQYIKLLESGQQGHRRFIESARDLVRRYNFDGLDLALQ 153

  Fly   147 YPT--------------------LLGGHPDDRQN------FVILLEELGLIFRKNQLILMVAVLG 185
            .|.                    ..|....|.::      ...|:::|....::|.|:|.:.||.
  Fly   154 LPRNKPRKVHGDVGSAWKSFKKFFTGDFIVDTESETHKGQVTALIKDLSAALKQNDLLLSLTVLP 218

  Fly   186 RRDNRILESYNIPEIVNHSDFIHLMMHD----EQDPYHLRLAYNAPLVGYEG---------SVTD 237
            ..::...  |:.|.|....|||:|...|    :::|.  ...::||.  ||.         ::..
  Fly   219 NVNSSWY--YDAPSIAPSLDFINLGTFDFLTPQRNPE--EADFSAPT--YEAVGQNRLGHYNLNF 277

  Fly   238 SIMHWKRNGGAPEKLILGIPLFVRSFTMDRNQ---------STVGSACKGPGRQTKQSHRPGFMT 293
            .:.||........|:.:||..:.||:.|.::.         ||.|.|..||     ||.:.|.:.
  Fly   278 QMEHWLLQRVPANKINIGIATYGRSWKMSKDSGDSGMPVVPSTQGPAPAGP-----QSKQEGLLN 337

  Fly   294 YNEWCVQQSKWS------------RMFDQLAKV-PYATR-----GDQ--WVSYENPRSIWAKMHL 338
            :.|.|......|            |:.|...:. .||.|     ||.  |:||::|.|..:|...
  Fly   338 WAEICSLMPNPSNSNARGPNAPVKRVVDPTKRYGSYAFRAADENGDHGLWISYDDPDSASSKAMY 402

  Fly   339 LQEHKLGGAMAWTIDVDDFRGRC-GEQHGLLRVI 371
            .:...|||...:.:..|||||:| .::..:||.|
  Fly   403 ARARNLGGVALFDLTQDDFRGQCTNDRFPMLRAI 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:299167 103/423 (24%)
Glyco_hydro_18 47..355 CDD:279094 88/380 (23%)
ChtBD2 394..438 CDD:214696
Idgf3NP_001285982.1 GH18_IDGF 26..440 CDD:119352 104/424 (25%)
Glyco_18 27..419 CDD:214753 94/404 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463820
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11177
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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