DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and Idgf1

DIOPT Version :9

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_477258.1 Gene:Idgf1 / 34978 FlyBaseID:FBgn0020416 Length:439 Species:Drosophila melanogaster


Alignment Length:454 Identity:109/454 - (24%)
Similarity:197/454 - (43%) Gaps:98/454 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FQYVFMIMIFLICGCIAKEYNVFCQYDLGSYYYKGRSQFFEWHLDSRL--CTHLVLG-SGIGVDG 65
            ||..:::.:..:........|:.|.||..||..:|.::.....||..|  |||||.| :|:    
  Fly     3 FQLFYILGLLSVTSLTHAASNLICYYDSNSYLRQGLAKMHTNELDLALQFCTHLVYGYAGL---- 63

  Fly    66 DSGELRI----TDKILLLEKDKLSSVKTMKWDSIKKVMFTIGGWEE-DSSSFSRMV----ASPKK 121
            .||.|.:    .|..:...|| ::::: .|:..: |::.::||..: |.:..::.|    |:...
  Fly    64 KSGTLELFSLNVDLDMFYYKD-ITALR-QKFPQL-KILLSVGGDRDVDEAHPNKYVELLEANRTA 125

  Fly   122 RDNFYSSMLEFMFRWGFDGVQIDWRYPT--------LLGGH------------------PDDRQN 160
            :.||..|.:..:.|.||||:.:.::.|.        .||.:                  .:.:..
  Fly   126 QQNFIDSSMILLKRNGFDGLDLAFQLPRNKPRKVHGSLGSYWKSFKKLFTGDFVVDPQAEEHKSQ 190

  Fly   161 FVILLEELGLIFRKNQLILMVAVLGRRDNRILESYNIPEIVNHSDFIHLMMHDEQDPYHLR---- 221
            |..|:..:...||...|:|.:.||...::...  :::|::....|:|:|...|...|  ||    
  Fly   191 FTDLVGNIKNAFRSANLMLSLTVLPNVNSTWY--FDVPKLHPQFDYINLAAFDFLTP--LRNPEE 251

  Fly   222 LAYNAPLVGYEG-------SVTDSIMHWKRNGGAPEKLILGIPLFVRSFTMDRNQSTVGS----- 274
            ..:.||:...:.       :|...|.:|.:|....:||.|||..:.|::.:.:.....|:     
  Fly   252 ADFTAPIFFQDEQNRLPHLNVEFQINYWLQNHCPGQKLNLGIASYGRAWKLSKGSGLSGAPIVHE 316

  Fly   275 AC-KGPGRQTKQSHRPGFMTYNEWC--VQQSKWSRMFDQLA---KVP--------YATR-----G 320
            .| ..||....|| ..|.:::.|.|  :.|:..::...:||   ||.        ||.|     |
  Fly   317 TCGVAPGGIQIQS-AEGLLSWPEICSKLSQNASAQYRGELAPLRKVTDLTQKYGNYALRPADDNG 380

  Fly   321 D--QWVSYENP-----RSIWAKMHLLQEHKLGGAMAWTIDVDDFRGRC-GEQHGLLRVIFSALG 376
            |  .|:|:::|     ::::||     ...|||...:.:..|||||.| |:::.:||.|...:|
  Fly   381 DFGVWLSFDDPDFAGIKAVYAK-----GKGLGGIALFDLSYDDFRGLCTGQKYPILRSIKYFMG 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:299167 105/430 (24%)
Glyco_hydro_18 47..355 CDD:279094 89/387 (23%)
ChtBD2 394..438 CDD:214696
Idgf1NP_477258.1 GH18_IDGF 23..438 CDD:119352 106/431 (25%)
Glyco_18 24..417 CDD:214753 95/409 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463819
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11177
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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