DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and Cht6

DIOPT Version :9

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_001245598.1 Gene:Cht6 / 31935 FlyBaseID:FBgn0263132 Length:4611 Species:Drosophila melanogaster


Alignment Length:556 Identity:152/556 - (27%)
Similarity:239/556 - (42%) Gaps:130/556 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IFLICG---CI---AKEYNVFCQYDLGSYYYKGRSQFFEWHLDSRLCTHLVLGSGIGVDGDSGEL 70
            :||:|.   ||   :.|..|.|.|...|.|..|.::|...:::..||||||...| |...|: ::
  Fly    13 LFLLCALAYCINEASSEGRVVCYYTNWSVYRPGTAKFNPQNINPYLCTHLVYAFG-GFTKDN-QM 75

  Fly    71 RITDKILLLEKD---KLSSVKTMKWDSIKKVMFTIGGWEEDSSSFSRMVASPKKRDNFYSSMLEF 132
            :..||...:|:.   |.:.:||  ::...|.|..||||.|.||.||.:|||.::|..|..::|:|
  Fly    76 KPFDKYQDIEQGGYAKFTGLKT--YNKQLKTMIAIGGWNEASSRFSPLVASNERRQQFIKNILKF 138

  Fly   133 MFRWGFDGVQIDWRYPT-LLGGHPDDRQNFVILLEELGLIFR-------KNQLILMVAVLGRRDN 189
            :.:..|||:.:||.||. ..||...||.|:...::||...|.       :.:|:|.:||....: 
  Fly   139 LRQNHFDGIDLDWEYPAHREGGKSRDRDNYAQFVQELRAEFEREAEKTGRTRLLLTMAVPAGIE- 202

  Fly   190 RILESYNIPEIVNHSDFIHLMMHDEQDPYHLRLAYNAPLVGYEG----------SVTDSIMHWKR 244
            .|.:.|::|::..:.|:.:::.:|....:...:.::|||...|.          ::..||.::.:
  Fly   203 YIDKGYDVPKLNKYLDWFNVLTYDFHSSHEPSVNHHAPLYSLEEDSEYNYDAELNIDYSIKYYLK 267

  Fly   245 NGGAPEKLILGIPLFVRSFTMDRNQST-VGSACKGPGRQTKQSHRPGFMTYNEWC---VQQSKWS 305
            .|...:||:||||.:.||:|:...:|| :|:..:|||.|...:...|::.|.|.|   ....:|:
  Fly   268 AGADRDKLVLGIPTYGRSYTLINEESTELGAPAEGPGEQGDATREKGYLAYYEICQTLKDDPEWT 332

  Fly   306 RMFDQLAKV--PYATRGDQWVSYENPRSIWAKMHLLQEHKLGGAMAWTIDVDDFRGRC-GEQHGL 367
             :....|.|  |||.|.:|||.|::...:..|...:....|||.|.|.||.|||||.| |:.:.|
  Fly   333 -VVQPNANVMGPYAYRRNQWVGYDDEAIVRKKAEYVVAQGLGGIMFWAIDNDDFRGTCNGKPYPL 396

  Fly   368 LRVIFSALGDKNGL-------------------------------TTEKP--------------- 386
            :.....|:.:..||                               .||.|               
  Fly   397 IEAAKEAMVEALGLGINEVAKPSGPQKPSRSRSRDNASNRNRLNGKTEAPLSSRRPSATRRPAVS 461

  Fly   387 ------------TTEASG-------------------------LCPHDGFSRDGWDCRLYHECRD 414
                        .|||.|                         .|..:||.:...||:.|:.|.|
  Fly   462 STQAPPPSTTFKLTEAEGSSLYIGGRASTTPPPPTTPDPGSDFKCEEEGFFQHPRDCKKYYWCLD 526

  Fly   415 ----GERI---YYECLEGQYFDENQIVCRPAAEVKC 443
                |..|   .:.|..|.||:.....|..|..|.|
  Fly   527 SGPSGLGIVAHMFTCPSGLYFNPAADSCDFARNVPC 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:299167 118/377 (31%)
Glyco_hydro_18 47..355 CDD:279094 103/334 (31%)
ChtBD2 394..438 CDD:214696 15/50 (30%)
Cht6NP_001245598.1 Glyco_18 31..383 CDD:214753 110/357 (31%)
GH18_chitolectin_chitotriosidase 32..404 CDD:119351 118/377 (31%)
CBM_14 506..562 CDD:279884 17/55 (31%)
Oxidored_q2 <2691..2750 CDD:294335
CBM_14 4554..4609 CDD:279884
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 1 1.000 - - otm46727
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11177
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.920

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