DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and RGD1309110

DIOPT Version :9

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:XP_006233175.1 Gene:RGD1309110 / 295352 RGDID:1309110 Length:440 Species:Rattus norvegicus


Alignment Length:420 Identity:117/420 - (27%)
Similarity:208/420 - (49%) Gaps:40/420 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VFMIMIFLICGC-IAKEYNVFCQYDLGSYYYKGRSQFFEWHLDSRLCTHLVLG-SGIGVDGDSGE 69
            ||::.:.|:... :...|.:.|.::....|...........:|..|||||:.. :||..:.::  
  Rat    22 VFIMGLNLLLNVQLDSAYQLMCYFNNWPQYQPDVRGMKLDDIDPCLCTHLIYSFAGIWENNNT-- 84

  Fly    70 LRITDKILLLEKDKLSSVKTMKWDSIKKVMFTIGGWEEDSSSFSRMVASPKKRDNFYSSMLEFMF 134
              :|.:..|.:..:.:.:|  |.::..|.:.:||.|..::..|..||::|:.|..|.:|:.:|:.
  Rat    85 --MTKRKDLDDYKEFNDLK--KRNNKLKTLLSIGCWNFEAGLFITMVSTPESRHTFITSVRKFLR 145

  Fly   135 RWGFDGVQIDWRYPTLLGGHPDDRQNFVILLEELGLIF-------RKNQLILMVAVLGRRDNRIL 192
            ::||||:.:.|:||...|..|.|:..|.||.:|:...|       :|::||:..|:.| ..:.|.
  Rat   146 KYGFDGLNLAWQYPGCYGSPPKDKHLFTILTQEIRKAFEKEVSKNKKSRLIITAALAG-VISPIQ 209

  Fly   193 ESYNIPEIVNHSDFIHLMMHDEQDPYHLRLAYNAPLVGYEGSVTDSI---------MH-WKRNGG 247
            ..|::|::....|:|.:|.:|....:......|:||  |:......:         || ||..|.
  Rat   210 FGYHVPQLSQSLDYIQVMTYDLHGSWDGYTGENSPL--YKSPAETGVKAFYNIKYTMHNWKNKGV 272

  Fly   248 APEKLILGIPLFVRSFTM-DRNQSTVGS-ACKG--PGRQTKQSHRPGFMTYNEWCVQQSKWS-RM 307
            :|||||:|.|.:..:|.: |..::.:|: :.:|  ||..||::   ||..|.|.|......: ::
  Rat   273 SPEKLIVGFPAYGHTFILSDSTKTEIGAPSNRGGHPGPYTKKT---GFWAYYEICAFLKNGAIQV 334

  Fly   308 FDQLAKVPYATRGDQWVSYENPRSIWAKMHLLQEHKLGGAMAWTIDVDDFRGRCGEQHGLLRVIF 372
            ::...:||||..|::||.|:|.:|...|...|:.:..||||.|.|.:||:.|...:|...  .:.
  Rat   335 WNAAQQVPYAFHGNEWVGYDNVKSFHIKAQWLKNNNFGGAMIWAIGMDDYTGSFCDQGPF--PLT 397

  Fly   373 SALGDKNGLTTEKPTTEASGLCPHDGFSRD 402
            |.|  ||.|.....:.:.:.|..:...|||
  Rat   398 STL--KNALKVHSASCKVTALSANVTGSRD 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:299167 105/372 (28%)
Glyco_hydro_18 47..355 CDD:279094 98/330 (30%)
ChtBD2 394..438 CDD:214696 3/9 (33%)
RGD1309110XP_006233175.1 GH18_chitolectin_chitotriosidase 41..404 CDD:119351 108/378 (29%)
Glyco_18 43..382 CDD:214753 100/350 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X91
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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