DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and Chi3l3

DIOPT Version :10

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_001399479.1 Gene:Chi3l3 / 295351 RGDID:1308790 Length:401 Species:Rattus norvegicus


Alignment Length:380 Identity:115/380 - (30%)
Similarity:191/380 - (50%) Gaps:41/380 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 MIFLICGCIAKEYNVFCQYDLGSYYYKGR---SQFFEWHLDSRLCTHLVLG-SGIGVDGDSGELR 71
            :..|:...:...|.:.|.|   :.:.|.|   ..|...::|..|||||:.. :|:    .:.|:.
  Rat    10 LAILLYAHLGSSYQLMCYY---TSWAKDRPTVGSFKIGNIDPCLCTHLIYAFAGM----RNNEII 67

  Fly    72 ITDKILLLEKDKLSSVKTMKWDSIKKVMFTIGGWEEDSSSFSRMVASPKKRDNFYSSMLEFMFRW 136
            .|.:..|::.:.::.:|....:  .|.:..||||:..|:.||.||::|:.|..|..|:::|:.::
  Rat    68 NTSEQDLIDYEAINYLKDRNTE--LKTLLAIGGWKFGSAPFSAMVSTPQNRQTFIKSVIKFLRQY 130

  Fly   137 GFDGVQIDWRYPTLLGGHPDDRQNFVILLEELGLIFRKN-------QLILMVAVLGRRDNRILES 194
            .|||:.:||:||...|..|.|:..|.:|::|:...|.|.       :|:|...|.|..|. |...
  Rat   131 KFDGLNLDWQYPGSRGSPPKDKHLFSVLVQEMRKAFEKESTEQEIPRLLLTATVAGVIDT-IQSG 194

  Fly   195 YNIPEIVNHSDFIHLM---MHDEQDPYHLRLAYNAPLVGYEG----------SVTDSIMHWKRNG 246
            |.|||:....|:..:|   :||.|:.|   ...|:||  |:.          :|...|.:||.||
  Rat   195 YKIPELSQSLDYFQVMTYNLHDFQNGY---TRENSPL--YQSPSDTGIYAYLNVDAIISYWKDNG 254

  Fly   247 GAPEKLILGIPLFVRSFTM-DRNQSTVGSACKGPGRQTKQSHRPGFMTYNEWCVQQSKWSR-MFD 309
            .|.||||:|.|.:..:|.: |.:.:.:.:.....|...|.:...|...|.|.|...:..:. ::|
  Rat   255 AAREKLIVGFPAYGHNFILSDPSNTGINAPIVSTGPPGKFTGEAGLWAYYEICTFLNDGATDLWD 319

  Fly   310 QLAKVPYATRGDQWVSYENPRSIWAKMHLLQEHKLGGAMAWTIDVDDFRGRCGEQ 364
            ...:||||.:|:.||.|:|.:|...|...|:::||||||.|.:|:|||.|...:|
  Rat   320 GPQEVPYAVQGNVWVGYDNVKSFKIKAQWLKDNKLGGAMVWPLDMDDFTGSFCQQ 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:471972 113/366 (31%)
ChtBD2 394..438 CDD:214696
Chi3l3NP_001399479.1 GH18_chitolectin_chitotriosidase 24..387 CDD:119351 113/366 (31%)
Blue background indicates that the domain is not in the aligned region.

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