DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and Chit1

DIOPT Version :10

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_001073157.1 Gene:Chit1 / 289032 RGDID:1305646 Length:464 Species:Rattus norvegicus


Alignment Length:466 Identity:135/466 - (28%)
Similarity:218/466 - (46%) Gaps:58/466 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 MIFLICGCIAKEYNVFCQYDLGSYYYKGRSQFFEWHLDSRLCTHLVLG-SGIGVDGDSGELRITD 74
            ::.:..|..||   :||.:...:.|..|.::|....:|..||||::.. :|:. :.....:...|
  Rat    13 LLMIQWGSAAK---LFCYFTNWAQYRSGAARFLPRDVDPNLCTHVIYAFAGLN-NHQVSTVEPND 73

  Fly    75 KILLLEKDKLSSVKTMKWDSIKKVMFTIGGWEEDSSSFSRMVASPKKRDNFYSSMLEFMFRWGFD 139
            ::...|   |:|:|  |.:...|.:..:|||...:..|:.|||:...|..|.:|.|.|:...|||
  Rat    74 ELFYQE---LNSLK--KRNPKLKTLLAVGGWSFGTQKFTDMVATASTRQTFVNSALSFLRTHGFD 133

  Fly   140 GVQIDWRYPTLLGGHPDDRQNFVILLEELGLIFR-------KNQLILMVAV-LGRRDNRILESYN 196
            |:.:||.||...|....|::.|..|:::|...|:       |::|:|..|| .||  ..:...|.
  Rat   134 GLDLDWEYPGSRGSPAVDKERFTALIQDLAKAFQEEARASGKSRLLLTAAVPTGR--GHVDAGYE 196

  Fly   197 IPEIVNHSDFIHLMMHDEQDPYHLRLAYNAPLVGYEG--------SVTDSIMHWKRNGGAPEKLI 253
            :.:||...|||:||.:|....:.....:|:||...:|        :|..::..|.:.|....||:
  Rat   197 VDKIVQSLDFINLMAYDFHSSWDKTTGHNSPLYKRQGETGKDAEKNVDAAVTLWLQKGTPASKLM 261

  Fly   254 LGIPLFVRSFTM-DRNQSTVGSACKGPGRQTKQSHRPGFMTYNEWCVQQSKWSRMFDQLAKVPYA 317
            ||:|.:.||||: ..:.|.||:...|||.....:...|.:.|.|.|..:.| .|:.||  ||||.
  Rat   262 LGMPAYGRSFTLASSSDSGVGAPATGPGAPGPYTKEKGILVYFEVCSWKGK-QRIEDQ--KVPYV 323

  Fly   318 TRGDQWVSYENPRSIWAKMHLLQEHKLGGAMAWTIDVDDFRGR-CGE-QHGLLRVIFSALGDKNG 380
            ::|:|||.:::..|..||...:::..|||||.|.:|.|||:|. |.| |:.|:|.:...|...:|
  Rat   324 SQGNQWVGFDDRESFRAKAAYVKQKGLGGAMVWILDGDDFKGSFCNEGQYPLIRTLHQELSLSSG 388

  Fly   381 LTTEKPTTEASGLCPH---------------------DGFSRDGWDCRLYHECRDGERIYYECLE 424
             ....|..|..|  ||                     ||...:..:...::.|..|....:.|..
  Rat   389 -PPRSPEQEVPG--PHQPSEPEQGPSPGLDDFCQGKADGLYPNPTEKSSFYSCGGGRLFQHSCPP 450

  Fly   425 GQYFDENQIVC 435
            |..|.::...|
  Rat   451 GLVFIDSCKCC 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:471972 117/369 (32%)
ChtBD2 394..438 CDD:214696 10/63 (16%)
Chit1NP_001073157.1 GH18_chitolectin_chitotriosidase 24..383 CDD:119351 117/369 (32%)
ChtBD2 416..463 CDD:214696 8/46 (17%)

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