DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht12 and chil-26

DIOPT Version :10

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_001317724.1 Gene:chil-26 / 188615 WormBaseID:WBGene00011847 Length:345 Species:Caenorhabditis elegans


Alignment Length:275 Identity:51/275 - (18%)
Similarity:91/275 - (33%) Gaps:83/275 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 DSIKKVMFTIGGWEEDSSSFSRMVASPKKRDNFYSSMLEFMFRWGFDGVQIDWRYPTLLGGHPDD 157
            :::.::: :||| ...|...|.|:...||...|..|::.|:.....|||::.|...|       :
 Worm   120 NNVNRIL-SIGG-TNYSEKLSIMLQDLKKTRRFIMSIIRFLKDNELDGVELLWNRNT-------E 175

  Fly   158 RQNFVILLEELGLIFRKNQLILMVAVLGRRDNRILESYNIPEIVNHSDFIHLMMHDEQDPYHLRL 222
            ...:..||:.|.:            .|.:::.:...|..:|:.......|...:.|:::...:.|
 Worm   176 ETLYCELLQHLKM------------GLEKQEKQYSISLRVPQTGIGKWHIGCELEDQENADSINL 228

  Fly   223 ----AYNAPLVGYEGSVTDSIMH---WKR-----NGGAPEKLILGIPLFVRSFTMDRNQSTVGSA 275
                .|...|.|..|.:..|...   |:.     |.....|..|.||..                
 Worm   229 ISMAEYENQLFGSGGVIRISEAFNTAWEMKYHACNSNQSSKFNLVIPTI---------------- 277

  Fly   276 CKGPGRQTKQSHRPGFMTYNEWCVQQSKWSRMFDQLAKVPYATRGDQWVSYENPRSIWAKMHLLQ 340
                 .||:|..    |.| .|..::.:..| |:...|..|.                       
 Worm   278 -----EQTEQID----MQY-VWNPEKKEIQR-FNSSTKTEYT----------------------- 308

  Fly   341 EHKLGGAMAWTIDVD 355
            :.::||...|:.|:|
 Worm   309 KLQMGGVSIWSRDMD 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:471972 51/275 (19%)
ChtBD2 394..438 CDD:214696
chil-26NP_001317724.1 Glyco_18 82..323 CDD:214753 50/273 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.