DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and R09D1.14

DIOPT Version :9

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_496028.1 Gene:R09D1.14 / 187741 WormBaseID:WBGene00011170 Length:150 Species:Caenorhabditis elegans


Alignment Length:122 Identity:31/122 - (25%)
Similarity:57/122 - (46%) Gaps:19/122 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 CQYDLGSYYYKGRSQFFEWHLDSRLCTHLVLG-------SGIGVDGDSGELRITDKILLLEKDKL 84
            |...:..||:..::........|.| ||.|..       ..:.:|||..:.|.|: ::.:.|.:.
 Worm    41 CNKRIIGYYFATQTSVITSDQVSNL-THAVFAFVNITSDGQLQIDGDLAKNRFTN-LIEIAKQQT 103

  Fly    85 SSVKTMKWDSIKKVMFTIGGWEEDSSSFSRMVASPKKRDNFYSSMLEFMFRWGFDGV 141
            ..|         |||.:||| .::|::|..:::||.::..|.:|.:.|:..:..|||
 Worm   104 PQV---------KVMISIGG-NDNSNNFKPVLSSPDRKKLFINSTVSFLQTYDIDGV 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:299167 31/122 (25%)
Glyco_hydro_18 47..355 CDD:279094 28/102 (27%)
ChtBD2 394..438 CDD:214696
R09D1.14NP_496028.1 Glyco_18 44..>150 CDD:214753 28/117 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164355
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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