DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and chil-17

DIOPT Version :10

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_496019.1 Gene:chil-17 / 187733 WormBaseID:WBGene00011159 Length:435 Species:Caenorhabditis elegans


Alignment Length:409 Identity:93/409 - (22%)
Similarity:168/409 - (41%) Gaps:103/409 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IFLICGCIAKEYNVF--------------------CQYDLGSYYYKGRSQFFEWHLDSRLCTHLV 56
            |||.||.::.....|                    |:..:..||.:..|.....:..::| ||.|
 Worm    39 IFLFCGIVSYALTTFVFHFYKEDKFSKNEVGLDPICKRRIVGYYSEYDSTDISKNQLAKL-THAV 102

  Fly    57 LGSGIGVDGDSGELRITDKILLLEKDKLSSVKT--MKWDSIKKVMFTIGGWEEDSSSFSRMVASP 119
            . :.:.:..| |.|:..:   |:.:.|..|:|:  ....|..|:||:||| :|:|..||..:|:.
 Worm   103 F-AFVDIKYD-GTLQFKN---LITEQKFFSLKSKARSLHSNLKLMFSIGG-DENSFDFSSALANT 161

  Fly   120 KKRDNFYSSMLEFMFRWGFDGVQIDWRYPTLLGGHPDDRQNFVILLEELGLIFRKN------QLI 178
            :.:....:|::.|:.....|||.:.|::||     ..|:.|:..|:.|:    |:.      ::|
 Worm   162 QMKSTLITSIIAFIHSHMIDGVDLHWKWPT-----SRDKSNYATLIREI----REKVDELDAKII 217

  Fly   179 LMVAV--LGRRDNRILES-YNIPEIVNHSDFIHLMMHDEQDP------------------YHLRL 222
            :.:.:  :|..|   .|| :::..|..|.|||::...|...|                  ..||.
 Worm   218 ISITIPPVGVSD---WESGFDLDAIQKHVDFINVHSMDYAKPLPNQWGTPTGPSASMNFNIGLRQ 279

  Fly   223 AYNAPLVGYEGSVTDSIMHWKRNGGAPEKLILGIPLFVRSF-----TMD------RNQSTVGSAC 276
            .||         |..::.|:......|..:.|.||.:||.:     .:|      ||.....:..
 Worm   280 HYN---------VDWTMKHYTCELKKPSMINLVIPFYVRMWKNVQKAIDNRTEVFRNVELKDNEV 335

  Fly   277 KGPGRQTKQSHRPGFMTYNEWCVQQSKWSRMFDQLAKVPYA----TRGDQWVSYENPRSIWAKMH 337
            :|..:.::.:     :.:.:..:....|    |...:.||.    ||  .:.:|||.:||..|:.
 Worm   336 EGRSQLSRYT-----VEHEDMELSPESW----DNATQTPYVLDLKTR--TFFTYENEKSIKVKLD 389

  Fly   338 LLQEHKLGGAMAWTIDVDD 356
            .:.:..|||...|::|:||
 Worm   390 YVNKMDLGGVWIWSVDMDD 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:471972 88/396 (22%)
ChtBD2 394..438 CDD:214696
chil-17NP_496019.1 Glyco_18 77..407 CDD:214753 84/368 (23%)
Blue background indicates that the domain is not in the aligned region.

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