DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and chil-16

DIOPT Version :10

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_496020.1 Gene:chil-16 / 187732 WormBaseID:WBGene00011158 Length:440 Species:Caenorhabditis elegans


Alignment Length:382 Identity:90/382 - (23%)
Similarity:169/382 - (44%) Gaps:67/382 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LGSYYYKGRSQFFEWHLDSRLCTHLVLG-SGIGVDG----DSGELRITDKILLLEKDKLSSVKTM 90
            :|.||..|........| ::| ||.|.. ..:..||    :|.:.:  :..|.|.  ||:|:  :
 Worm    89 VGYYYRNGNDSIMMGQL-AKL-THAVFAFLELHPDGTIHFESRKAK--ESFLYLR--KLASI--L 145

  Fly    91 KWDSIKKVMFTIGGWEEDSSSFSRMVASPKKRDNFYSSMLEFMFRWGFDGVQIDWRYPTLLGGHP 155
            |:|:  |:||:||| ..::..||.::.:.:.:..|..|::.|:.::..|||.:.|::.:     .
 Worm   146 KFDA--KIMFSIGG-PANTQFFSPIIQNEEMKRKFIDSIIYFLKQYKLDGVDLFWKWSS-----S 202

  Fly   156 DDRQNFVILLEELG---LIFRKNQLILMVAVLGRRDNRILESYNIPEIVNHSDFIHLMMHDEQDP 217
            .|:..:...|:||.   ...|:|.:|.:|......|...| .|::.||:.|.||:::...|...|
 Worm   203 GDKFTYSSFLQELKHKLRSHRQNYIISIVLPPAGVDTWEL-GYDLEEIMEHVDFMNVYSMDYSGP 266

  Fly   218 YHLR----------LAYN-APLVGYEGSVTDSIMHWKRNGGAPEKLILGIPLFVRSF-----TMD 266
            :..:          ||:| .|...:  :|..::.::......|.|..:.||.:.|.:     .:|
 Worm   267 WDNQWGTPTGPSAPLAFNIGPRKNF--NVDWTMKYYSCKTQQPGKFNMVIPFYARYWNNVQEAVD 329

  Fly   267 RNQSTVGSACKGPGRQTKQSHRPG--FMTYNEWCVQQSKWSRMFDQLAKVPYATRGDQ--WVSYE 327
            .......:|      :.:.:...|  :|..:....:.:.|    |.|...||..:.|:  :.::|
 Worm   330 PRTEVFRNA------EIRNNRADGVPYMDRSSADYKMASW----DNLTSTPYIWKPDERRFFTFE 384

  Fly   328 NPRSIWAKMHLLQEHKLGGAMAWTIDVDDFRGRCGEQHGLLRVIFSALGDKNGLTTE 384
            |.:||..|.....:..|||...|::|:.|        ||  .|:.||:..:..||::
 Worm   385 NQKSIAIKTRYAIDMNLGGVWIWSVDMGD--------HG--NVLLSAVASQEFLTSK 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:471972 87/371 (23%)
ChtBD2 394..438 CDD:214696
chil-16NP_496020.1 Glyco_18 87..411 CDD:214753 81/350 (23%)
Blue background indicates that the domain is not in the aligned region.

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