DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and chil-12

DIOPT Version :9

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_506770.2 Gene:chil-12 / 187357 WormBaseID:WBGene00010799 Length:450 Species:Caenorhabditis elegans


Alignment Length:449 Identity:92/449 - (20%)
Similarity:165/449 - (36%) Gaps:122/449 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 YNVFCQYDLGSYYYKGRSQFFEWHLDSRLCTHLVLGSGIGVDGDSG-----------------EL 70
            |......|..|.|...:::|.....:...|:..::|...|. .||.                 :|
 Worm    62 YTPLSSPDASSIYNSFKNKFPPIKTEENTCSKRIIGYYSGT-SDSEITINQVSKLTHAIFAFVQL 125

  Fly    71 RITDKILLLEKDKLSSVKTM--KWDSIKKVMFTIGGWEEDSSSFSRMVASPKKRDNFYSSMLEFM 133
            .....::...|::..:::.:  ..:|..|.||:||| ...|.:||.:|.:.:|:..|..|:..|:
 Worm   126 TFDGTLVFRNKNRFMALRNIAKTENSTVKFMFSIGG-PGHSQNFSPVVRNQEKKRRFIKSIFSFL 189

  Fly   134 FRWGFDGVQIDWRYPTLLGGHPDDRQNFVILLEELGLIFRKNQLILMVAVLGRRDNRILESYNIP 198
            .....|||.|.|::|     |..|:..:...|.||..|.:..:..::..::..:.......:.:.
 Worm   190 EEHKLDGVDIFWKWP-----HLADKHAYSQFLLELNEILKTRKDYILSILVPPQGIGFASGFKMN 249

  Fly   199 EIVNHSDFIHLMMHDEQDPYHLRLAYNAPLVGYEGSVTDSIM----------HWKRNGGA----- 248
            |||.:.|||::...|          |..|.....|:.|..|.          .|..:..|     
 Worm   250 EIVENVDFINIFAMD----------YYGPWASGWGNPTGPISPIYGGSERREQWNVDNTAAIYSC 304

  Fly   249 ----PEKLILGIPLFVRSFTMDRNQSTVGSACKGPGRQT-------------------KQSHRPG 290
                ..|..:.||.|.|.:      :.||.....||::.                   :.:.:.|
 Worm   305 ETMRSSKFNIVIPFFARLW------NNVGKPIDFPGKEVYRNVTLIDGKAVGEVYMPRRSALQKG 363

  Fly   291 F--MTYNEWCVQQSKWSRMFDQLAKVP--YATRGDQWVSYENPRSIWAKMHLLQEHKLGGAMAWT 351
            :  .:||            :|.|::..  |.:...:::::|..|||.||:..:|...|||...|.
 Worm   364 YNLSSYN------------YDDLSETAFIYNSTTKEYLTFEVKRSIAAKLDYVQNMNLGGVWIWQ 416

  Fly   352 IDVDDFRGRCGEQHGLL-RVIFSALGDKNGLTTEKPTTEASGLCPHDGFSRDGWDCRLY 409
            :|:||      |...|| .|:|.     :|..:.|.:.|              :||.::
 Worm   417 MDMDD------ESDKLLDTVVFD-----DGFCSTKKSKE--------------YDCSMF 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:299167 86/411 (21%)
Glyco_hydro_18 47..355 CDD:279094 75/368 (20%)
ChtBD2 394..438 CDD:214696 2/16 (13%)
chil-12NP_506770.2 Glyco_18 94..420 CDD:214753 74/360 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164360
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28694
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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