DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Cht12 and K08F9.3

DIOPT Version :9

Sequence 1:	NP_726022.1	Gene:	Cht12 / 246535	FlyBaseID:	FBgn0050293	Length:	470	Species:	Drosophila melanogaster
Sequence 2:	NP_001263897.1	Gene:	K08F9.3 / 187168	WormBaseID:	WBGene00010686	Length:	287	Species:	Caenorhabditis elegans

Alignment Length:	228	Identity:	47/228 - (20%)
Similarity:	89/228 - (39%)	Gaps:	58/228 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly    10 IMIFLICGCIAKEYNV------FCQYDLGSYY--YKGR----SQFFEWHLDSRLCTHLVLGSGIG 62
            ::||.|...::...:|      .|...|..||  .:||    :||..       .||.|..|...
Worm    97 VLIFGIYSLVSHSGHVQSTTPDQCDKQLIGYYNGIEGRNILENQFHN-------LTHAVFTSEFV 154

  Fly    63 VDGDSGELRITDKILLLEKDKLSSVKTMKWDSIKKVMFTIGGWEEDSSSFSRMVASPKKRDNFYS 127
            .:..|.|....::..|..:.||.     :.:|..|:|..:|        |::  .|.|     ..
Worm   155 NENGSFENSHKEQEFLECRKKLG-----ESNSTAKIMIAMG--------FNK--GSCK-----ID 199

  Fly   128 SMLEFMFRWGFDGVQIDWRYPTLLGGHPDDRQNFVILLEELGLIFRKNQLILMVAVLG----RRD 188
            .:..|:.::..|||::.|.:          .::|:..||....:..:.:.|....:||    ...
Worm   200 CITSFIEKYQVDGVELHWNH----------NEHFLSQLETTRNLKNRLKKISNSKLLGVSASSNW 254

  Fly   189 NRILESYNIPEIVNHSDFIHLMMHD--EQDPYH 219
            :|:.|   :.:::..:||:::.:||  ..|..|
Worm   255 SRVTE---LDQVLEVADFVNIELHDNLRSDNLH 284

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Cht12	NP_726022.1	GH18_chitinase-like	25..375	CDD:299167	44/213 (21%)
		Glyco_hydro_18	47..355	CDD:279094	35/179 (20%)
		ChtBD2	394..438	CDD:214696
K08F9.3	NP_001263897.1	Glyco_hydro_18	122..>272	CDD:279094	38/189 (20%)
K08F9.3	NP_001263897.1	GH18_chitinase-like	124..276	CDD:299167	38/191 (20%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1289629at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920