DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and chil-11

DIOPT Version :10

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_500856.2 Gene:chil-11 / 183470 WormBaseID:WBGene00016665 Length:389 Species:Caenorhabditis elegans


Alignment Length:404 Identity:88/404 - (21%)
Similarity:162/404 - (40%) Gaps:86/404 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LGSYYYKGRSQFFEWHLDSRLCTHLVLGS------GIGVDGDSGELRITDKILLLEKDKLSSVKT 89
            :|.|..|..|:.....| ||| ||.|.||      |....|::...|.........|:..|:||:
 Worm    15 IGYYIQKESSEISTVGL-SRL-THAVFGSLRVQLNGTFEIGNAFSKRKFKNWQRAVKNSSSNVKS 77

  Fly    90 M----KWDSIKKVMFTIGGWEEDSSSFSRMVASPKKRDNFYSSMLEFMFRWGFDGVQIDWRYPTL 150
            |    :|||:              :..|.::.:.|.|..|..|:::|:.....||:.:.||:..|
 Worm    78 MISIGRWDSV--------------TQLSSVLLNVKSRRMFIESIVDFLKEHQLDGIDLFWRWVPL 128

  Fly   151 LGGHPDDRQNFVILLEELGLIF--RKNQLILMVAVLGRRDNRILESYNIPEIVNHSDFIHLMMHD 213
            .     .:..|.:.|||:.:.|  ::.|.||.:...........:.|:|.||:...||:::...:
 Worm   129 A-----VQSEFCLFLEEVKIEFLNQEKQYILSITAPPVGIENYEDGYDIEEIIERVDFVNVYSMN 188

  Fly   214 EQDPYHLR----LAYNAPLVG-----YEGSVTDSIMHWKRNGGAPEKLILGIPLFVRSFTMDRNQ 269
            ...|:..:    ...:|||.|     .:.||..::.::.|....|||..|.||.:||.:      
 Worm   189 YAAPWSNQWGTPTGPSAPLYGGLDARRKFSVDYTMKYYIRYTRKPEKFNLIIPFYVRHW------ 247

  Fly   270 STVGSACKGPGRQTKQSHRPGFMTYNEWCVQ---------QSKWSR----------MFDQLAKVP 315
                       |..:.:.:||...:....:|         .|:|:.          .:|...|..
 Worm   248 -----------RNVENAIKPGIEVFRNVTLQNNGAIGEVYMSRWTAESDGIELSNPSWDDTTKTL 301

  Fly   316 YATRGD--QWVSYENPRSIWAKMHLLQEHKLGGAMAWTIDVDDFRGRCGEQHGLLRVIFSALGDK 378
            |..:.:  .::::|..:||.||.:.::...|||...|.::.||      :.:.::..:....|:.
 Worm   302 YIWKPETKTFITFETEKSIEAKANYVKSMNLGGVWIWLMENDD------QDNSMIEAVSGQFGNP 360

  Fly   379 NGLTTEKPTTEASG 392
            :...::....|:.|
 Worm   361 SDDQSQYGVIESVG 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:471972 85/385 (22%)
ChtBD2 394..438 CDD:214696
chil-11NP_500856.2 Glyco_18 13..343 CDD:214753 83/365 (23%)
Blue background indicates that the domain is not in the aligned region.

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