DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and chil-11

DIOPT Version :9

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_500856.2 Gene:chil-11 / 183470 WormBaseID:WBGene00016665 Length:389 Species:Caenorhabditis elegans


Alignment Length:404 Identity:88/404 - (21%)
Similarity:162/404 - (40%) Gaps:86/404 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LGSYYYKGRSQFFEWHLDSRLCTHLVLGS------GIGVDGDSGELRITDKILLLEKDKLSSVKT 89
            :|.|..|..|:.....| ||| ||.|.||      |....|::...|.........|:..|:||:
 Worm    15 IGYYIQKESSEISTVGL-SRL-THAVFGSLRVQLNGTFEIGNAFSKRKFKNWQRAVKNSSSNVKS 77

  Fly    90 M----KWDSIKKVMFTIGGWEEDSSSFSRMVASPKKRDNFYSSMLEFMFRWGFDGVQIDWRYPTL 150
            |    :|||:              :..|.::.:.|.|..|..|:::|:.....||:.:.||:..|
 Worm    78 MISIGRWDSV--------------TQLSSVLLNVKSRRMFIESIVDFLKEHQLDGIDLFWRWVPL 128

  Fly   151 LGGHPDDRQNFVILLEELGLIF--RKNQLILMVAVLGRRDNRILESYNIPEIVNHSDFIHLMMHD 213
            .     .:..|.:.|||:.:.|  ::.|.||.:...........:.|:|.||:...||:::...:
 Worm   129 A-----VQSEFCLFLEEVKIEFLNQEKQYILSITAPPVGIENYEDGYDIEEIIERVDFVNVYSMN 188

  Fly   214 EQDPYHLR----LAYNAPLVG-----YEGSVTDSIMHWKRNGGAPEKLILGIPLFVRSFTMDRNQ 269
            ...|:..:    ...:|||.|     .:.||..::.::.|....|||..|.||.:||.:      
 Worm   189 YAAPWSNQWGTPTGPSAPLYGGLDARRKFSVDYTMKYYIRYTRKPEKFNLIIPFYVRHW------ 247

  Fly   270 STVGSACKGPGRQTKQSHRPGFMTYNEWCVQ---------QSKWSR----------MFDQLAKVP 315
                       |..:.:.:||...:....:|         .|:|:.          .:|...|..
 Worm   248 -----------RNVENAIKPGIEVFRNVTLQNNGAIGEVYMSRWTAESDGIELSNPSWDDTTKTL 301

  Fly   316 YATRGD--QWVSYENPRSIWAKMHLLQEHKLGGAMAWTIDVDDFRGRCGEQHGLLRVIFSALGDK 378
            |..:.:  .::::|..:||.||.:.::...|||...|.::.||      :.:.::..:....|:.
 Worm   302 YIWKPETKTFITFETEKSIEAKANYVKSMNLGGVWIWLMENDD------QDNSMIEAVSGQFGNP 360

  Fly   379 NGLTTEKPTTEASG 392
            :...::....|:.|
 Worm   361 SDDQSQYGVIESVG 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:299167 85/385 (22%)
Glyco_hydro_18 47..355 CDD:279094 79/349 (23%)
ChtBD2 394..438 CDD:214696
chil-11NP_500856.2 Glyco_18 13..343 CDD:214753 83/365 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164351
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28694
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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