DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and chil-4

DIOPT Version :9

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_496125.1 Gene:chil-4 / 182434 WormBaseID:WBGene00007469 Length:457 Species:Caenorhabditis elegans


Alignment Length:367 Identity:93/367 - (25%)
Similarity:162/367 - (44%) Gaps:86/367 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 RLCTHLVLGSGIGVDGD---SGELRITDKILLLEKDKLSSVK--TMKWDSIKKVMFTIGGWEEDS 109
            ::.||::....|..:|:   .||         ..:.|...:|  ..|.:|..|||.:||| :.:|
 Worm   130 QMLTHIIYLFAIPKNGNMTFGGE---------RSRRKFEEMKNEARKANSTLKVMISIGG-QSNS 184

  Fly   110 SSFSRMVASPKKRDNFYSSMLEFMFRWGFDGVQIDWRYPTLLGGHPDDRQNFVILLEELGLIF-- 172
            .||||:|::...|:.|.:|::.|:.::..||::|.|.:|..     :|..|::|.::||...|  
 Worm   185 RSFSRLVSNETSRNVFVNSIVSFVQKYDIDGIEIFWTWPKY-----EDANNYLIFIQELRYAFIE 244

  Fly   173 ------RKNQLILMVAVLGRRDNRILESYNIPEIVNHSDFIHL-MMHDEQDPYHLR-LAYNAPLV 229
                  ||...::.: ::...||::.......:.|   ||.:: .:|     |..| :..::||.
 Worm   245 LQKKLNRKEDYVISI-IVNCYDNQLSNLMGFSKFV---DFFNIYSIH-----YQSRQVGPSSPLY 300

  Fly   230 GYEGS--VTDSIMHWKRNGGAPEKLILGIPLFVRSFTMDRNQSTVGSACKGPGR-------QTKQ 285
            | .||  :.:::.::....|.|.|..:.: ||         ..|.....:.|.|       :.:.
 Worm   301 G-GGSRNIDETMKYYICRTGQPSKFNMMV-LF---------HGTFWKGAELPLRNDSDDIFKDQN 354

  Fly   286 SHRPGFMTYNEWC-VQQSKWSR---MFDQLAKVPYATRGDQWV-------SYENPRSIWAKMHLL 339
            |.:.||..  .|. :.|.||..   .|..|.|..|     .|:       :.|:.:|:..|...:
 Worm   355 SAKGGFAV--RWRELLQQKWDMSNIKFHNLTKTSY-----MWIPGSSLFLTLEDEQSLRVKNRYV 412

  Fly   340 QEHKLGGAMAWTIDVDDFRGRCGEQHGLLRVIFSA---LGDK 378
            .:|.:||...||||.||     |: |.||:|:.||   .||:
 Worm   413 ADHNIGGITMWTIDQDD-----GD-HTLLKVVSSAELCTGDE 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:299167 91/362 (25%)
Glyco_hydro_18 47..355 CDD:279094 82/339 (24%)
ChtBD2 394..438 CDD:214696
chil-4NP_496125.1 Glyco_18 111..428 CDD:214753 82/339 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164343
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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