DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and chil-4

DIOPT Version :10

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_496125.1 Gene:chil-4 / 182434 WormBaseID:WBGene00007469 Length:457 Species:Caenorhabditis elegans


Alignment Length:367 Identity:93/367 - (25%)
Similarity:164/367 - (44%) Gaps:86/367 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 RLCTHLVLGSGIGVDGD---SGELRITDKILLLEKDKLSSVK--TMKWDSIKKVMFTIGGWEEDS 109
            ::.||::....|..:|:   .||         ..:.|...:|  ..|.:|..|||.:||| :.:|
 Worm   130 QMLTHIIYLFAIPKNGNMTFGGE---------RSRRKFEEMKNEARKANSTLKVMISIGG-QSNS 184

  Fly   110 SSFSRMVASPKKRDNFYSSMLEFMFRWGFDGVQIDWRYPTLLGGHPDDRQNFVILLEELGLIF-- 172
            .||||:|::...|:.|.:|::.|:.::..||::|.|.:|..     :|..|::|.::||...|  
 Worm   185 RSFSRLVSNETSRNVFVNSIVSFVQKYDIDGIEIFWTWPKY-----EDANNYLIFIQELRYAFIE 244

  Fly   173 ------RKNQLILMVAVLGRRDNRILESYNIPEIVNHSDFIHL-MMHDEQDPYHLR-LAYNAPLV 229
                  ||...::.: ::...||::.......:.|   ||.:: .:|     |..| :..::||.
 Worm   245 LQKKLNRKEDYVISI-IVNCYDNQLSNLMGFSKFV---DFFNIYSIH-----YQSRQVGPSSPLY 300

  Fly   230 GYEGS--VTDSIMHWKRNGGAPEKLILGIPLFVRSFTMDRNQSTVGSACKGPGR-------QTKQ 285
            | .||  :.:::.::....|.|.|..:.: ||         ..|.....:.|.|       :.:.
 Worm   301 G-GGSRNIDETMKYYICRTGQPSKFNMMV-LF---------HGTFWKGAELPLRNDSDDIFKDQN 354

  Fly   286 SHRPGF-MTYNEWCVQQSKWSR---MFDQLAKVPYATRGDQWV-------SYENPRSIWAKMHLL 339
            |.:.|| :.:.|  :.|.||..   .|..|.|..|     .|:       :.|:.:|:..|...:
 Worm   355 SAKGGFAVRWRE--LLQQKWDMSNIKFHNLTKTSY-----MWIPGSSLFLTLEDEQSLRVKNRYV 412

  Fly   340 QEHKLGGAMAWTIDVDDFRGRCGEQHGLLRVIFSA---LGDK 378
            .:|.:||...||||.||     |: |.||:|:.||   .||:
 Worm   413 ADHNIGGITMWTIDQDD-----GD-HTLLKVVSSAELCTGDE 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:471972 91/362 (25%)
ChtBD2 394..438 CDD:214696
chil-4NP_496125.1 Glyco_18 111..428 CDD:214753 82/339 (24%)
Blue background indicates that the domain is not in the aligned region.

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