DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht12 and chil-2

DIOPT Version :9

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_496133.2 Gene:chil-2 / 182431 WormBaseID:WBGene00007466 Length:383 Species:Caenorhabditis elegans


Alignment Length:402 Identity:86/402 - (21%)
Similarity:157/402 - (39%) Gaps:105/402 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 NVFCQYDLGSYYYKGRSQFFEWHLDSRLCTHLVLGS-GIGVDGDSGELRITDKILLLEKDKLSSV 87
            |..||..:.:|    .::|...|...:| ||.:..| .|..:|                      
 Worm    36 NFKCQKRVVAY----SAKFLSNHQLKKL-THFIFTSISIFPNG---------------------- 73

  Fly    88 KTMKWDSIK----------------KVMFTIGGWEEDSSSFSRMVASPKKRDNFYSSMLEFMFRW 136
             |:||.:.:                |:|..|.|      .|..::|..:|:::|..|:..|:...
 Worm    74 -TIKWPNCENFESYARKAKMDNPNLKIMVEING------KFFSVLAEDEKKNSFIKSISSFVVDH 131

  Fly   137 GFDGVQIDWRYPTLLGGHPDDRQNFVILLEELGLIFR---KNQLILMVAVLGRRDNRILESYNIP 198
            .||||.|.|.:       |:|...|.:.::|    ||   :..:|:.:|:  .|..:.||.:|:.
 Worm   132 KFDGVDIFWSW-------PEDEDTFHLFIKE----FREKLEKHMIISIAI--PRLAQQLEGFNLK 183

  Fly   199 EIVNHSDFIHLMMHDEQDPYHLRLAYNAPLV----GYEGSVTDSIMHWKRNGGAPEKLILGIP-- 257
            .::||.||::::..:..:|.....|...|:.    |..|:|..::.:.......|..|.:|:.  
 Worm   184 LLMNHIDFLNVLSINYYEPLPGNGANIGPISPLYGGQRGNVDGTLKYLTCITKRPSILNMGVTFT 248

  Fly   258 -LFVRSFTMDRNQS----TVGSACKGPGRQT--KQSHRPGFMTYNEWCVQQSKWSRMFDQLAKVP 315
             :|........|:.    .|.....|||:..  ::..:....|..:| ...||.|..:|..:|: 
 Worm   249 GIFWNGVKDGLNEQDDIWKVAQNENGPGKSIGWRKFIKDRRNTIPQW-HDSSKSSYAWDPKSKI- 311

  Fly   316 YATRGDQWVSYENPRSIWAKMHLLQEHKLGGAMAWTIDVDDFRGRCGEQHGLLRVIFSALGDKNG 380
                   ::::||.:|:..|:..::...:||.:.|.:|.||      ..:.||          |.
 Worm   312 -------FLAFENEKSLSEKVIYVRNKNIGGLVIWNVDQDD------NDNSLL----------NA 353

  Fly   381 LTTEKPTTEASG 392
            ||:.......||
 Worm   354 LTSMDMCARGSG 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:299167 80/382 (21%)
Glyco_hydro_18 47..355 CDD:279094 71/340 (21%)
ChtBD2 394..438 CDD:214696
chil-2NP_496133.2 Glyco_18 42..344 CDD:214753 74/357 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164348
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28694
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.760

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