DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht12 and chil-1

DIOPT Version :10

Sequence 1:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_001040740.1 Gene:chil-1 / 182430 WormBaseID:WBGene00007465 Length:465 Species:Caenorhabditis elegans


Alignment Length:358 Identity:85/358 - (23%)
Similarity:153/358 - (42%) Gaps:78/358 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 RLCTHLVLGSGIGVDGDSGELRITDKILLLEKDKLSSVKTMKWDSIKKVMFTIGGWEEDSSSFSR 114
            ::.||::....|   ..:|.:.|.|...|.:.:::.| ...:..|..|:|.:||| ..:|.|||.
 Worm   137 QMLTHIIYLFAI---PRNGVITIVDDRSLRKFEEMKS-NAREASSTLKIMISIGG-HYNSRSFSG 196

  Fly   115 MVASPKKRDNFYSSMLEFMFRWGFDGVQIDWRYPTLLGGHPDDRQNFVILLEELGLIF------- 172
            :|.:...|..|.:|::.|:.::..||:::.|.:|..     .|:.|:::.::||...|       
 Worm   197 LVFNETSRTVFVNSIVSFVEKYDIDGIEMFWMWPRY-----RDKNNYLMFIQELRYAFTELQNKL 256

  Fly   173 -RKNQLILMVAVLGRRDNRILESYNIPEIVNHSDFIHLMMHDEQDPYHLRLAYNAPLVGYEGSVT 236
             ||...:  ::::...:..:|  :|:.|.:|..||..:.:.:.   |..::..::||.|......
 Worm   257 NRKEDFV--ISLVASSNLNLL--FNLVEFLNSVDFFGIYLFNS---YSYQVGPDSPLYGGGSRNV 314

  Fly   237 DSIM-HWKRNGGAPEKLILGIPLFVRSFTMDRNQSTVGSACKGPGRQTKQSHRPGFMTYNEWCVQ 300
            |.|| ::....|.|.|..:     :.||     .:|.......|.|....         |.|.|.
 Worm   315 DEIMKYYICKTGQPSKFNI-----IISF-----HATYWEGTDLPLRDDSD---------NIWKVN 360

  Fly   301 QS---------------KWSR---MFDQLAKVPY------ATRGDQWVSYENPRSIWAKMHLLQE 341
            :|               ||:.   .|..|.|..|      .||   :::.|:.:|:..|...:.:
 Worm   361 ESGRLAVALRWRELPHHKWNLENIKFHNLTKTSYIWIPGPPTR---FLTLEDEQSLREKNRYVAD 422

  Fly   342 HKLGGAMAWTIDVDDFRGRCGEQHGLLRVIFSA 374
            |.:||...||||.||      :.|.||:|:.||
 Worm   423 HNIGGITMWTIDQDD------DDHTLLKVVSSA 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:471972 85/358 (24%)
ChtBD2 394..438 CDD:214696
chil-1NP_001040740.1 Glyco_18 118..436 CDD:214753 77/337 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.