Sequence 1: | NP_726022.1 | Gene: | Cht12 / 246535 | FlyBaseID: | FBgn0050293 | Length: | 470 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_504862.2 | Gene: | lmd-4 / 179121 | WormBaseID: | WBGene00017233 | Length: | 2011 | Species: | Caenorhabditis elegans |
Alignment Length: | 503 | Identity: | 119/503 - (23%) |
---|---|---|---|
Similarity: | 200/503 - (39%) | Gaps: | 124/503 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 31 LGSYYYKGRSQFFEWHLDSRLCTHLVL--------GS---GIGVDGDSG---ELRITDKILLLEK 81
Fly 82 DKLSSVKTMKWDSIKKVMFTIGGWEEDSSSFSRMVASPKKRDNFYSSMLEFMFRWGFDGVQIDWR 146
Fly 147 YPTLLGGHPDDRQNFVILLEELGLIF--------RKNQLILMVAVLGRRDNRILESYNIPEIVNH 203
Fly 204 SDFIHLMMHDEQDPYHLRL-AYN---APLV-----GYEGSVTD--SIMHWKRNGGAPEKLILGIP 257
Fly 258 LFVRSF-----TMDRNQSTVGSACKGPGRQTKQSHRPGFMTYNE-----WCVQQSKWSRMFDQLA 312
Fly 313 KVPYATR--GDQWVSYENPRSIWAKMHLLQEHKLGGAMAWTIDVDDFRGRCGEQHGLLRVIFSA- 374
Fly 375 -----LGDK-----------NGLTTEKPTTEASGLC---------------PHD-GFSRDGWDCR 407
Fly 408 LYHECRDGERIYYECLEGQYFDENQIVCRPAAEVKCDQNFVIWRPGMP 455 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cht12 | NP_726022.1 | GH18_chitinase-like | 25..375 | CDD:299167 | 97/394 (25%) |
Glyco_hydro_18 | 47..355 | CDD:279094 | 87/352 (25%) | ||
ChtBD2 | 394..438 | CDD:214696 | 12/59 (20%) | ||
lmd-4 | NP_504862.2 | LysM | 25..65 | CDD:197609 | |
LysM | 79..120 | CDD:197609 | |||
LysM | 142..185 | CDD:197609 | |||
LysM | 209..250 | CDD:197609 | |||
LysM | 270..313 | CDD:197609 | |||
LysM | 334..377 | CDD:197609 | |||
LysM | 401..444 | CDD:197609 | |||
LysM | 469..509 | CDD:197609 | |||
LysM | 550..590 | CDD:197609 | |||
LysM | 635..678 | CDD:197609 | |||
LysM | 710..750 | CDD:197609 | |||
LysM | 760..802 | CDD:197609 | |||
LysM | 876..919 | CDD:197609 | |||
Self-incomp_S1 | 1359..1433 | CDD:283566 | |||
Glyco_18 | 1480..1825 | CDD:214753 | 89/364 (24%) | ||
GH18_chitinase-like | 1481..1824 | CDD:299167 | 89/363 (25%) | ||
ChtBD1_GH18_2 | 1873..1924 | CDD:211315 | 13/68 (19%) | ||
ChtBD1_GH18_2 | 1951..2002 | CDD:211315 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160164350 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG3325 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1289629at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.750 |